PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2489
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAS
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Gene Pathway Family Confidence Status Best Target
codonopsis_lanceolata_Cl_chr07_27100T Steroid CAS medium pass CAS__00009__sp_Q6Z2X6_CAS_ORYSJ
codonopsis_lanceolata_Cl_chr07_35770T Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
codonopsis_lanceolata_Cl_chr07_36480T Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
codonopsis_lanceolata_Cl_chr08_00660T Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
codonopsis_lanceolata_Cl_chr08_07160T Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
codonopsis_lanceolata_Cl_chr08_10050T Steroid CAS medium pass CAS__00009__sp_Q6Z2X6_CAS_ORYSJ
codonopsis_lanceolata_Cl_chr08_10060T Steroid CAS medium pass CAS__00009__sp_Q6Z2X6_CAS_ORYSJ
codonopsis_lanceolata_Cl_chr08_10070T Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
codonopsis_lanceolata_Cl_chr08_16100T Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
codonopsis_lanceolata_Cl_chr08_16110T Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
codonopsis_lanceolata_Cl_chr08_19120T Steroid CAS medium pass CAS__00013__sp_Q9SLP9_CAS1_LUFAE
codonopsis_lanceolata_Cl_chr08_19140T Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
codonopsis_lanceolata_Cl_chr08_19150T Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
codonopsis_lanceolata_Cl_chr08_19160T Steroid CAS medium pass CAS__00009__sp_Q6Z2X6_CAS_ORYSJ
codonopsis_lanceolata_Cl_chr08_23330T Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
codonopsis_lanceolata_Cl_chr08_23340T Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
codonopsis_lanceolata_Cl_chr08_23350T Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
codonopsis_lanceolata_Cl_chr08_23360T Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
codonopsis_lanceolata_Cl_chr08_23450T Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
codonopsis_lanceolata_Cl_chr08_23800T Steroid CAS medium pass CAS__00004__sp_O82139_CAS1_PANGI
codonopsis_lanceolata_Cl_chr08_23810T Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL