PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2489
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status Best Target
codonopsis_lanceolata_Cl_chr04_34840T Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
codonopsis_lanceolata_Cl_chr05_11320T Phenylpropanoid CSE low borderline CSE__00002__sp_Q9C942_CSE_ARATH
codonopsis_lanceolata_Cl_chr05_14550T Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
codonopsis_lanceolata_Cl_chr05_14840T Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
codonopsis_lanceolata_Cl_chr05_14870T Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
codonopsis_lanceolata_Cl_chr05_14890T Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
codonopsis_lanceolata_Cl_chr05_14900T Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
codonopsis_lanceolata_Cl_chr05_16900T Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
codonopsis_lanceolata_Cl_chr05_16910T Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
codonopsis_lanceolata_Cl_chr05_17210T Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
codonopsis_lanceolata_Cl_chr05_17230T Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
codonopsis_lanceolata_Cl_chr05_17280T Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
codonopsis_lanceolata_Cl_chr05_25690T Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
codonopsis_lanceolata_Cl_chr05_43230T Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
codonopsis_lanceolata_Cl_chr05_43260T Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
codonopsis_lanceolata_Cl_chr06_08770T Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
codonopsis_lanceolata_Cl_chr06_11470T Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
codonopsis_lanceolata_Cl_chr06_39350T Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
codonopsis_lanceolata_Cl_chr07_26530T Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
codonopsis_lanceolata_Cl_chr07_30320T Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
codonopsis_lanceolata_Cl_chr08_01550T Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
codonopsis_lanceolata_Cl_chr08_06130T Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
codonopsis_lanceolata_Cl_chr08_32020T Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL