PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2489
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
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Gene Pathway Family Confidence Status
codonopsis_lanceolata_Cl_chr04_03270T Steroid CYP90D1 low borderline
codonopsis_lanceolata_Cl_chr04_05690T Steroid CYP90D1 low borderline
codonopsis_lanceolata_Cl_chr04_08250T Steroid CYP90D1 low borderline
codonopsis_lanceolata_Cl_chr04_13210T Steroid CYP90D1 medium pass
codonopsis_lanceolata_Cl_chr04_13930T Steroid CYP90D1 low borderline
codonopsis_lanceolata_Cl_chr04_16820T Steroid CYP90D1 low borderline
codonopsis_lanceolata_Cl_chr04_27500T Steroid CYP90D1 low borderline
codonopsis_lanceolata_Cl_chr04_42370T Steroid CYP90D1 low borderline
codonopsis_lanceolata_Cl_chr04_42390T Steroid CYP90D1 low borderline
codonopsis_lanceolata_Cl_chr05_00240T Steroid CYP90D1 low borderline
codonopsis_lanceolata_Cl_chr05_12520T Steroid CYP90D1 low borderline
codonopsis_lanceolata_Cl_chr05_12870T Steroid CYP90D1 medium borderline
codonopsis_lanceolata_Cl_chr05_30600T Steroid CYP90D1 low borderline
codonopsis_lanceolata_Cl_chr06_14350T Steroid CYP90D1 low borderline
codonopsis_lanceolata_Cl_chr06_29390T Steroid CYP90D1 medium borderline
codonopsis_lanceolata_Cl_chr06_31750T Steroid CYP90D1 low borderline
codonopsis_lanceolata_Cl_chr07_03600T Steroid CYP90D1 medium borderline
codonopsis_lanceolata_Cl_chr07_03670T Steroid CYP90D1 medium borderline
codonopsis_lanceolata_Cl_chr07_05100T Steroid CYP90D1 low borderline
codonopsis_lanceolata_Cl_chr07_13910T Steroid CYP90D1 low borderline
codonopsis_lanceolata_Cl_chr07_13980T Steroid CYP90D1 low borderline
codonopsis_lanceolata_Cl_chr07_14490T Steroid CYP90D1 low borderline
codonopsis_lanceolata_Cl_chr07_14510T Steroid CYP90D1 low borderline
codonopsis_lanceolata_Cl_chr07_14530T Steroid CYP90D1 low borderline
codonopsis_lanceolata_Cl_chr07_25980T Steroid CYP90D1 low borderline
codonopsis_lanceolata_Cl_chr07_35760T Steroid CYP90D1 low borderline
codonopsis_lanceolata_Cl_chr07_35780T Steroid CYP90D1 medium borderline
codonopsis_lanceolata_Cl_chr07_35810T Steroid CYP90D1 low borderline
codonopsis_lanceolata_Cl_chr07_35900T Steroid CYP90D1 low borderline
codonopsis_lanceolata_Cl_chr07_39210T Steroid CYP90D1 low borderline
codonopsis_lanceolata_Cl_chr08_30150T Steroid CYP90D1 low borderline
codonopsis_lanceolata_Cl_chr08_36330T Steroid CYP90D1 low borderline
codonopsis_lanceolata_Cl_chr08_38660T Steroid CYP90D1 medium borderline
codonopsis_lanceolata_Cl_chr08_38680T Steroid CYP90D1 medium borderline