PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2489
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
codonopsis_lanceolata_Cl_chr06_36520T Flavonoid F3H low borderline
codonopsis_lanceolata_Cl_chr06_36980T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr06_37000T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr06_37020T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr06_37530T Flavonoid F3H low borderline
codonopsis_lanceolata_Cl_chr07_00220T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr07_01390T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr07_02510T Flavonoid F3H low borderline
codonopsis_lanceolata_Cl_chr07_02520T Flavonoid F3H low borderline
codonopsis_lanceolata_Cl_chr07_02530T Flavonoid F3H low borderline
codonopsis_lanceolata_Cl_chr07_04290T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr07_20530T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr07_20550T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr07_37760T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr07_39520T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr07_39530T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr07_39590T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr08_06790T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr08_06800T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr08_06810T Flavonoid F3H medium pass
codonopsis_lanceolata_Cl_chr08_06820T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr08_06850T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr08_06860T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr08_09480T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr08_09500T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr08_09520T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr08_09530T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr08_09540T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr08_09550T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr08_09560T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr08_09570T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr08_09580T Flavonoid F3H medium pass
codonopsis_lanceolata_Cl_chr08_09600T Flavonoid F3H medium pass
codonopsis_lanceolata_Cl_chr08_28260T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr08_28270T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr08_28280T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr08_32100T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr08_32110T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr08_32120T Flavonoid F3H medium pass
codonopsis_lanceolata_Cl_chr08_33100T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr08_34130T Flavonoid F3H low borderline