PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2489
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
codonopsis_lanceolata_Cl_chr04_38010T Alkaloid GS medium pass
codonopsis_lanceolata_Cl_chr04_38020T Alkaloid GS medium pass
codonopsis_lanceolata_Cl_chr04_55800T Alkaloid GS high pass
codonopsis_lanceolata_Cl_chr05_08150T Alkaloid GS low borderline
codonopsis_lanceolata_Cl_chr05_12220T Alkaloid GS low borderline
codonopsis_lanceolata_Cl_chr05_23000T Alkaloid GS high pass
codonopsis_lanceolata_Cl_chr05_23090T Alkaloid GS high pass
codonopsis_lanceolata_Cl_chr05_32870T Alkaloid GS medium pass
codonopsis_lanceolata_Cl_chr05_44960T Alkaloid GS low borderline
codonopsis_lanceolata_Cl_chr05_45810T Alkaloid GS high pass
codonopsis_lanceolata_Cl_chr06_08160T Alkaloid GS medium pass
codonopsis_lanceolata_Cl_chr06_24240T Alkaloid GS medium pass
codonopsis_lanceolata_Cl_chr06_33650T Alkaloid GS low borderline
codonopsis_lanceolata_Cl_chr06_33660T Alkaloid GS low borderline
codonopsis_lanceolata_Cl_chr06_33690T Alkaloid GS low borderline
codonopsis_lanceolata_Cl_chr06_33700T Alkaloid GS low borderline
codonopsis_lanceolata_Cl_chr06_33710T Alkaloid GS low borderline
codonopsis_lanceolata_Cl_chr07_00250T Alkaloid GS high pass
codonopsis_lanceolata_Cl_chr07_06600T Alkaloid GS medium pass
codonopsis_lanceolata_Cl_chr07_28560T Alkaloid GS low borderline
codonopsis_lanceolata_Cl_chr08_00480T Alkaloid GS high pass
codonopsis_lanceolata_Cl_chr08_02200T Alkaloid GS high pass
codonopsis_lanceolata_Cl_chr08_05600T Alkaloid GS medium pass
codonopsis_lanceolata_Cl_chr08_08740T Alkaloid GS medium pass
codonopsis_lanceolata_Cl_chr08_25480T Alkaloid GS low borderline
codonopsis_lanceolata_Cl_chr08_31220T Alkaloid GS medium pass
codonopsis_lanceolata_Cl_chr08_33170T Alkaloid GS low borderline
codonopsis_lanceolata_Cl_chr08_35310T Alkaloid GS medium pass