PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2489
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
codonopsis_lanceolata_Cl_chr06_11440T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr06_14210T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr06_14350T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr06_16980T Alkaloid T3O medium pass
codonopsis_lanceolata_Cl_chr06_16990T Alkaloid T3O medium pass
codonopsis_lanceolata_Cl_chr06_21000T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr06_25620T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr06_27160T Alkaloid T3O medium pass
codonopsis_lanceolata_Cl_chr06_29320T Alkaloid T3O medium pass
codonopsis_lanceolata_Cl_chr06_29340T Alkaloid T3O medium pass
codonopsis_lanceolata_Cl_chr06_29390T Alkaloid T3O medium pass
codonopsis_lanceolata_Cl_chr06_30840T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr06_31230T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr06_31590T Alkaloid T3O medium pass
codonopsis_lanceolata_Cl_chr06_31690T Alkaloid T3O low borderline
codonopsis_lanceolata_Cl_chr06_36860T Alkaloid T3O medium pass
codonopsis_lanceolata_Cl_chr07_00190T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr07_03670T Alkaloid T3O medium pass
codonopsis_lanceolata_Cl_chr07_04160T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr07_04910T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr07_04920T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr07_04940T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr07_04950T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr07_05020T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr07_05030T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr07_05040T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr07_05100T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr07_07480T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr07_12150T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr07_13910T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr07_13980T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr07_14490T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr07_14530T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr07_18950T Alkaloid T3O medium pass
codonopsis_lanceolata_Cl_chr07_35910T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr07_40340T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr08_03720T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr08_03730T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr08_23460T Alkaloid T3O low borderline
codonopsis_lanceolata_Cl_chr08_30150T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr08_32300T Alkaloid T3O medium pass
codonopsis_lanceolata_Cl_chr08_32530T Alkaloid T3O low borderline
codonopsis_lanceolata_Cl_chr08_39220T Alkaloid T3O medium borderline