Codonopsis lanceolata (codonopsis_lanceolata)
Imported from atlas release summary for Codonopsis lanceolata.
2489
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2489
Candidate Genes
C4H
6.96%
C3'H/CYP98A
6.22%
BAHD
4.42%
UGT
4.21%
T3O
3.89%
IFS
3.87%
4CL
3.86%
CYP76
3.79%
Other Families
62.78%
More Families (97)
7DLGT
225
3.6%
UFGT
215
3.44%
POD
188
3.01%
CAS
171
2.74%
DWF4/CYP90B1
158
2.53%
TPS
147
2.35%
F3H
141
2.26%
F3'H/CYP75B
139
2.22%
CAD
136
2.18%
BBE
116
1.86%
GES
116
1.86%
STR
103
1.65%
BR6OX2/CYP85A2
101
1.62%
CYP71
92
1.47%
CODM/T6ODM
89
1.42%
NMT
85
1.36%
CYP90D1
84
1.34%
SGD
80
1.28%
H6H
78
1.25%
GS
78
1.25%
CSE
73
1.17%
TAT
68
1.09%
IO
67
1.07%
T16H
63
1.01%
G8O/G8H
51
0.82%
LAC
49
0.78%
SMT1/SMT2/SMT3
49
0.78%
F3'5'H/CYP75A
45
0.72%
CPD/CYP90A1
45
0.72%
TRI/TRII
44
0.7%
FNS
40
0.64%
HCT
40
0.64%
7DLH
39
0.62%
F5H/CYP84A
36
0.58%
CYP51G1
36
0.58%
IFR
34
0.54%
ANR
30
0.48%
DFR
29
0.46%
COR
28
0.45%
CCR
28
0.45%
PYKS
26
0.42%
SLS
25
0.4%
PMT
23
0.37%
NCS
23
0.37%
ANS/LDOX
22
0.35%
BR6OX1/CYP85A1
22
0.35%
COMT
19
0.3%
PAL
18
0.29%
ROT3/CYP90C1
18
0.29%
FPPS
18
0.29%
8HGO
17
0.27%
LAMT
16
0.26%
ISY
13
0.21%
RAS
13
0.21%
HPPR
12
0.19%
GGPPS
12
0.19%
CNMT
11
0.18%
MPO
11
0.18%
CPR
11
0.18%
DET2
11
0.18%
CYP80B1
10
0.16%
CHS
10
0.16%
SQE
9
0.14%
SQS/FDFT1
8
0.13%
HMGR
8
0.13%
CYP719
7
0.11%
AACT
7
0.11%
XMT_MXMT_DXMT
6
0.1%
6OMT_4OMT_SOMT
6
0.1%
16OMT
6
0.1%
FLS
6
0.1%
CCoAOMT
6
0.1%
DXS
6
0.1%
SMO1/SMO2
4
0.06%
CHI
3
0.05%
MVK
3
0.05%
MVD
3
0.05%
MCT/IspD
3
0.05%
DXR
3
0.05%
HDS/IspG
3
0.05%
PMK
3
0.05%
TYDC_DDC
2
0.03%
ADC
2
0.03%
ODC
2
0.03%
FK
2
0.03%
DWF1
2
0.03%
DWF7
2
0.03%
CPI1
2
0.03%
CMK/IspE
2
0.03%
HMGS
2
0.03%
GPPS
2
0.03%
TDC
1
0.02%
DWF5
1
0.02%
HYD1
1
0.02%
HDR/IspH
1
0.02%
MDS/IspF
1
0.02%
IDI
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 715 | 20 | UGT (226) | View species results |
| Alkaloid pathway | 594 | 24 | 7DLGT (98) | View species results |
| Phenylpropanoid pathway | 439 | 12 | POD (165) | View species results |
| Flavonoid pathway | 303 | 11 | UFGT (197) | View species results |
| Rosmarinic acid pathway | 241 | 7 | C4H (105) | View species results |
| Steroid pathway | 197 | 15 | CAS (137) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 2584 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 329 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| codonopsis_lanceolata_Cl_chr01_17690T | Terpenoid | UGT | medium | pass | UGT__00102__sp_Q9LZD8_U89A2_ARATH |
| codonopsis_lanceolata_Cl_chr01_29370T | Terpenoid | UGT | low | borderline | UGT__00047__sp_K7NBW3_74AC1_SIRGR |
| codonopsis_lanceolata_Cl_chr01_30960T | Terpenoid | UGT | medium | pass | UGT__00047__sp_K7NBW3_74AC1_SIRGR |
| codonopsis_lanceolata_Cl_chr01_38110T | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| codonopsis_lanceolata_Cl_chr01_38130T | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| codonopsis_lanceolata_Cl_chr01_43910T | Terpenoid | UGT | medium | pass | UGT__00033__sp_F8WKW8_UGT9_GARJA |
| codonopsis_lanceolata_Cl_chr01_54870T | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| codonopsis_lanceolata_Cl_chr01_55990T | Terpenoid | UGT | medium | pass | UGT__00117__sp_U5NH37_7DLGT_CATRO |
| codonopsis_lanceolata_Cl_chr01_56730T | Terpenoid | UGT | medium | pass | UGT__00047__sp_K7NBW3_74AC1_SIRGR |
| codonopsis_lanceolata_Cl_chr01_56740T | Terpenoid | UGT | low | borderline | UGT__00067__sp_P0DO74_GT742_SIRGR |
| codonopsis_lanceolata_Cl_chr01_56750T | Terpenoid | UGT | medium | pass | UGT__00047__sp_K7NBW3_74AC1_SIRGR |
| codonopsis_lanceolata_Cl_chr01_58160T | Terpenoid | UGT | medium | pass | UGT__00063__sp_P0DO67_GT943_SIRGR |
| codonopsis_lanceolata_Cl_chr01_58180T | Terpenoid | UGT | medium | pass | UGT__00064__sp_P0DO71_GT941_SIRGR |
| codonopsis_lanceolata_Cl_chr02_00380T | Terpenoid | UGT | low | borderline | UGT__00082__sp_Q9C9B0_U89B1_ARATH |
| codonopsis_lanceolata_Cl_chr02_07550T | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| codonopsis_lanceolata_Cl_chr02_10730T | Terpenoid | UGT | medium | pass | UGT__00009__sp_A0A0G4DBR5_FG3N_SOYBN |
| codonopsis_lanceolata_Cl_chr02_15360T | Terpenoid | UGT | low | borderline | UGT__00057__sp_O81498_U72E3_ARATH |
| codonopsis_lanceolata_Cl_chr02_16970T | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| codonopsis_lanceolata_Cl_chr02_16980T | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| codonopsis_lanceolata_Cl_chr02_17020T | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| codonopsis_lanceolata_Cl_chr02_18490T | Terpenoid | UGT | low | borderline | UGT__00033__sp_F8WKW8_UGT9_GARJA |
| codonopsis_lanceolata_Cl_chr02_18790T | Terpenoid | UGT | medium | pass | UGT__00019__sp_A0A2R4LMF9_73C25_BARVU |
| codonopsis_lanceolata_Cl_chr02_27110T | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| codonopsis_lanceolata_Cl_chr02_30620T | Terpenoid | UGT | medium | pass | UGT__00088__sp_Q9LK73_U88A1_ARATH |
| codonopsis_lanceolata_Cl_chr02_30640T | Terpenoid | UGT | medium | pass | UGT__00088__sp_Q9LK73_U88A1_ARATH |
| codonopsis_lanceolata_Cl_chr02_35180T | Terpenoid | UGT | medium | pass | UGT__00081__sp_Q9C768_U76B1_ARATH |
| codonopsis_lanceolata_Cl_chr02_35900T | Terpenoid | UGT | low | borderline | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| codonopsis_lanceolata_Cl_chr02_35910T | Terpenoid | UGT | low | borderline | UGT__00019__sp_A0A2R4LMF9_73C25_BARVU |
| codonopsis_lanceolata_Cl_chr02_37480T | Terpenoid | UGT | medium | pass | UGT__00071__sp_Q6VAA6_U74G1_STERE |
| codonopsis_lanceolata_Cl_chr02_47360T | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| codonopsis_lanceolata_Cl_chr02_47430T | Terpenoid | UGT | low | borderline | UGT__00001__sp_A0A067YB04_UGT1_PUEML |
| codonopsis_lanceolata_Cl_chr02_48560T | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| codonopsis_lanceolata_Cl_chr02_59520T | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| codonopsis_lanceolata_Cl_chr02_59550T | Terpenoid | UGT | low | borderline | UGT__00024__sp_B3VI56_U91D2_STERE |
| codonopsis_lanceolata_Cl_chr02_59790T | Terpenoid | UGT | medium | pass | UGT__00115__sp_U3U992_UGT8_CATRO |
| codonopsis_lanceolata_Cl_chr02_60530T | Terpenoid | UGT | medium | pass | UGT__00111__sp_Q9ZQ99_U73C1_ARATH |
| codonopsis_lanceolata_Cl_chr02_60770T | Terpenoid | UGT | medium | pass | UGT__00115__sp_U3U992_UGT8_CATRO |
| codonopsis_lanceolata_Cl_chr02_61380T | Terpenoid | UGT | medium | pass | UGT__00027__sp_D3UAG0_U71K1_MALDO |
| codonopsis_lanceolata_Cl_chr02_61550T | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| codonopsis_lanceolata_Cl_chr02_61800T | Terpenoid | UGT | medium | pass | UGT__00116__sp_U3UA11_UGT7_CATRO |
| codonopsis_lanceolata_Cl_chr02_62110T | Terpenoid | UGT | medium | pass | UGT__00082__sp_Q9C9B0_U89B1_ARATH |
| codonopsis_lanceolata_Cl_chr02_63050T | Terpenoid | UGT | medium | pass | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| codonopsis_lanceolata_Cl_chr02_63080T | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| codonopsis_lanceolata_Cl_chr03_01790T | Terpenoid | UGT | medium | pass | UGT__00088__sp_Q9LK73_U88A1_ARATH |
| codonopsis_lanceolata_Cl_chr03_04050T | Terpenoid | UGT | medium | pass | UGT__00101__sp_Q9LVR1_U72E2_ARATH |
| codonopsis_lanceolata_Cl_chr03_08820T | Terpenoid | UGT | medium | pass | UGT__00043__sp_K4GHS2_73C13_BARVU |
| codonopsis_lanceolata_Cl_chr03_08920T | Terpenoid | UGT | medium | pass | UGT__00078__sp_Q8W491_U73B3_ARATH |
| codonopsis_lanceolata_Cl_chr03_13470T | Terpenoid | UGT | medium | pass | UGT__00026__sp_D3THI6_U7A15_MALDO |
| codonopsis_lanceolata_Cl_chr03_14650T | Terpenoid | UGT | medium | pass | UGT__00038__sp_K4CWS6_U75C1_SOLLC |
| codonopsis_lanceolata_Cl_chr03_14700T | Terpenoid | UGT | medium | pass | UGT__00105__sp_Q9SK82_U85A1_ARATH |