PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2489
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
codonopsis_lanceolata_Cl_chr06_30430T Flavonoid ANR medium borderline
codonopsis_lanceolata_Cl_chr07_05930T Flavonoid ANR high pass
codonopsis_lanceolata_Cl_chr07_05940T Flavonoid ANR medium borderline
codonopsis_lanceolata_Cl_chr07_05960T Flavonoid ANR medium borderline
codonopsis_lanceolata_Cl_chr07_06030T Flavonoid ANR medium borderline
codonopsis_lanceolata_Cl_chr07_06080T Flavonoid ANR medium borderline
codonopsis_lanceolata_Cl_chr07_08650T Flavonoid ANR low borderline
codonopsis_lanceolata_Cl_chr07_09120T Flavonoid ANR low borderline
codonopsis_lanceolata_Cl_chr07_09130T Flavonoid ANR medium pass
codonopsis_lanceolata_Cl_chr07_38660T Flavonoid ANR medium borderline
codonopsis_lanceolata_Cl_chr01_11100T Flavonoid ANS/LDOX low borderline
codonopsis_lanceolata_Cl_chr02_57510T Flavonoid ANS/LDOX medium borderline
codonopsis_lanceolata_Cl_chr03_05130T Flavonoid ANS/LDOX medium borderline
codonopsis_lanceolata_Cl_chr03_06150T Flavonoid ANS/LDOX medium borderline
codonopsis_lanceolata_Cl_chr03_31070T Flavonoid ANS/LDOX low borderline
codonopsis_lanceolata_Cl_chr04_17090T Flavonoid ANS/LDOX low borderline
codonopsis_lanceolata_Cl_chr04_18380T Flavonoid ANS/LDOX medium borderline
codonopsis_lanceolata_Cl_chr04_23570T Flavonoid ANS/LDOX medium borderline
codonopsis_lanceolata_Cl_chr04_32550T Flavonoid ANS/LDOX low borderline
codonopsis_lanceolata_Cl_chr04_37290T Flavonoid ANS/LDOX medium borderline
codonopsis_lanceolata_Cl_chr04_41720T Flavonoid ANS/LDOX medium pass
codonopsis_lanceolata_Cl_chr04_52780T Flavonoid ANS/LDOX medium pass
codonopsis_lanceolata_Cl_chr04_55850T Flavonoid ANS/LDOX medium borderline
codonopsis_lanceolata_Cl_chr06_02550T Flavonoid ANS/LDOX medium pass
codonopsis_lanceolata_Cl_chr06_11540T Flavonoid ANS/LDOX medium pass
codonopsis_lanceolata_Cl_chr06_36640T Flavonoid ANS/LDOX medium borderline
codonopsis_lanceolata_Cl_chr06_36960T Flavonoid ANS/LDOX medium borderline
codonopsis_lanceolata_Cl_chr07_23010T Flavonoid ANS/LDOX medium borderline
codonopsis_lanceolata_Cl_chr07_39550T Flavonoid ANS/LDOX medium borderline
codonopsis_lanceolata_Cl_chr07_39570T Flavonoid ANS/LDOX low borderline
codonopsis_lanceolata_Cl_chr07_39610T Flavonoid ANS/LDOX low borderline
codonopsis_lanceolata_Cl_chr08_06880T Flavonoid ANS/LDOX medium pass
codonopsis_lanceolata_Cl_C16120_unscaffolded_00010T Flavonoid C4H low borderline
codonopsis_lanceolata_Cl_C18596_unscaffolded_00010T Flavonoid C4H low borderline
codonopsis_lanceolata_Cl_C21944_unscaffolded_00010T Flavonoid C4H low borderline
codonopsis_lanceolata_Cl_C22588_unscaffolded_00010T Flavonoid C4H low borderline
codonopsis_lanceolata_Cl_chr01_56300T Flavonoid C4H medium borderline
codonopsis_lanceolata_Cl_chr02_04600T Flavonoid C4H low borderline
codonopsis_lanceolata_Cl_chr02_07870T Flavonoid C4H low borderline
codonopsis_lanceolata_Cl_chr03_04360T Flavonoid C4H low borderline
codonopsis_lanceolata_Cl_chr03_29450T Flavonoid C4H low borderline
codonopsis_lanceolata_Cl_chr04_08180T Flavonoid C4H low borderline
codonopsis_lanceolata_Cl_chr04_11950T Flavonoid C4H low borderline
codonopsis_lanceolata_Cl_chr04_13110T Flavonoid C4H low borderline
codonopsis_lanceolata_Cl_chr04_49500T Flavonoid C4H medium borderline
codonopsis_lanceolata_Cl_chr06_28260T Flavonoid C4H medium borderline
codonopsis_lanceolata_Cl_chr06_31320T Flavonoid C4H medium borderline
codonopsis_lanceolata_Cl_chr06_31690T Flavonoid C4H low borderline
codonopsis_lanceolata_Cl_chr03_45900T Flavonoid CHI medium pass
codonopsis_lanceolata_Cl_chr05_04210T Flavonoid CHI medium pass