PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2890
Candidate Protein Records
2489
Pathway-Level Records
6249
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
codonopsis_lanceolata_Cl_chr01_11270T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr01_11320T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr01_11330T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr01_12580T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr01_12660T Alkaloid T3O medium pass
codonopsis_lanceolata_Cl_chr01_15560T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr01_18190T Alkaloid T3O medium pass
codonopsis_lanceolata_Cl_chr01_23080T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr01_23530T Alkaloid T3O medium pass
codonopsis_lanceolata_Cl_chr01_24700T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr01_27310T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr01_27320T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr01_31020T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr01_33900T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr01_34010T Alkaloid T3O medium pass
codonopsis_lanceolata_Cl_chr01_34080T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr01_37390T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr01_38160T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr01_38850T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr01_38930T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr01_38960T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr01_40350T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr01_41320T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr01_42470T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr01_43900T Alkaloid T3O low borderline
codonopsis_lanceolata_Cl_chr01_48770T Alkaloid T3O low borderline
codonopsis_lanceolata_Cl_chr01_50470T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr01_54410T Alkaloid T3O medium pass
codonopsis_lanceolata_Cl_chr01_56350T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr01_56720T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr01_57790T Alkaloid T3O medium pass
codonopsis_lanceolata_Cl_chr01_59640T Alkaloid T3O medium pass
codonopsis_lanceolata_Cl_chr01_59760T Alkaloid T3O medium pass
codonopsis_lanceolata_Cl_chr01_60990T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr01_61330T Alkaloid T3O low borderline
codonopsis_lanceolata_Cl_chr02_00690T Alkaloid T3O low borderline
codonopsis_lanceolata_Cl_chr02_01470T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr02_02070T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr02_02100T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr02_02390T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr02_02400T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr02_03650T Alkaloid T3O medium pass
codonopsis_lanceolata_Cl_chr02_03660T Alkaloid T3O medium pass
codonopsis_lanceolata_Cl_chr02_04820T Alkaloid T3O low borderline
codonopsis_lanceolata_Cl_chr02_07880T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr02_10290T Alkaloid T3O medium pass
codonopsis_lanceolata_Cl_chr02_12420T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr02_12430T Alkaloid T3O medium borderline
codonopsis_lanceolata_Cl_chr02_13710T Alkaloid T3O medium pass
codonopsis_lanceolata_Cl_chr02_13730T Alkaloid T3O high pass