PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2489
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status Best Target
codonopsis_lanceolata_Cl_chr01_11600T Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
codonopsis_lanceolata_Cl_chr01_11610T Steroid CAS medium pass CAS__00004__sp_O82139_CAS1_PANGI
codonopsis_lanceolata_Cl_chr01_26050T Steroid CAS medium pass CAS__00004__sp_O82139_CAS1_PANGI
codonopsis_lanceolata_Cl_chr01_26060T Steroid CAS medium pass CAS__00010__sp_Q8W3Z3_CAS2_BETPL
codonopsis_lanceolata_Cl_chr01_26080T Steroid CAS medium pass CAS__00004__sp_O82139_CAS1_PANGI
codonopsis_lanceolata_Cl_chr01_33860T Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
codonopsis_lanceolata_Cl_chr01_33870T Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
codonopsis_lanceolata_Cl_chr01_33890T Steroid CAS medium pass CAS__00011__sp_Q8W3Z4_CAS1_BETPL
codonopsis_lanceolata_Cl_chr01_33930T Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
codonopsis_lanceolata_Cl_chr01_33970T Steroid CAS medium pass CAS__00010__sp_Q8W3Z3_CAS2_BETPL
codonopsis_lanceolata_Cl_chr01_33980T Steroid CAS medium pass CAS__00002__sp_E2IUB0_CASS_KALDA
codonopsis_lanceolata_Cl_chr01_36580T Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
codonopsis_lanceolata_Cl_chr01_38210T Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
codonopsis_lanceolata_Cl_chr01_40200T Steroid CAS medium pass CAS__00002__sp_E2IUB0_CASS_KALDA
codonopsis_lanceolata_Cl_chr01_40240T Steroid CAS medium pass CAS__00004__sp_O82139_CAS1_PANGI
codonopsis_lanceolata_Cl_chr01_44560T Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
codonopsis_lanceolata_Cl_chr01_44570T Steroid CAS medium pass CAS__00011__sp_Q8W3Z4_CAS1_BETPL
codonopsis_lanceolata_Cl_chr01_46720T Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
codonopsis_lanceolata_Cl_chr01_50110T Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
codonopsis_lanceolata_Cl_chr01_60150T Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
codonopsis_lanceolata_Cl_chr01_60160T Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
codonopsis_lanceolata_Cl_chr02_01980T Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
codonopsis_lanceolata_Cl_chr02_01990T Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
codonopsis_lanceolata_Cl_chr02_02030T Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
codonopsis_lanceolata_Cl_chr02_02040T Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
codonopsis_lanceolata_Cl_chr02_02050T Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
codonopsis_lanceolata_Cl_chr02_02120T Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
codonopsis_lanceolata_Cl_chr02_02140T Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
codonopsis_lanceolata_Cl_chr02_12520T Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
codonopsis_lanceolata_Cl_chr02_16490T Steroid CAS medium pass CAS__00012__sp_Q9FN48_CAS_ARATH
codonopsis_lanceolata_Cl_chr02_16500T Steroid CAS medium pass CAS__00012__sp_Q9FN48_CAS_ARATH
codonopsis_lanceolata_Cl_chr02_36110T Steroid CAS medium pass CAS__00004__sp_O82139_CAS1_PANGI
codonopsis_lanceolata_Cl_chr02_37220T Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
codonopsis_lanceolata_Cl_chr02_37770T Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
codonopsis_lanceolata_Cl_chr02_42820T Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
codonopsis_lanceolata_Cl_chr02_43110T Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
codonopsis_lanceolata_Cl_chr02_43150T Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
codonopsis_lanceolata_Cl_chr02_43290T Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
codonopsis_lanceolata_Cl_chr02_45510T Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
codonopsis_lanceolata_Cl_chr02_45520T Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
codonopsis_lanceolata_Cl_chr03_01200T Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
codonopsis_lanceolata_Cl_chr03_01240T Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
codonopsis_lanceolata_Cl_chr03_01250T Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
codonopsis_lanceolata_Cl_chr03_01280T Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
codonopsis_lanceolata_Cl_chr03_01290T Steroid CAS medium pass CAS__00004__sp_O82139_CAS1_PANGI
codonopsis_lanceolata_Cl_chr03_01300T Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
codonopsis_lanceolata_Cl_chr03_02290T Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
codonopsis_lanceolata_Cl_chr03_02660T Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
codonopsis_lanceolata_Cl_chr03_07710T Steroid CAS medium pass CAS__00004__sp_O82139_CAS1_PANGI
codonopsis_lanceolata_Cl_chr03_07720T Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL