PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2489
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
codonopsis_lanceolata_Cl_chr05_13260T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr05_13270T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr05_17020T Steroid CAS low borderline
codonopsis_lanceolata_Cl_chr05_22180T Steroid CAS low borderline
codonopsis_lanceolata_Cl_chr05_22420T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr05_22440T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr05_23220T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr05_23400T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr05_31490T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr05_41810T Steroid CAS low borderline
codonopsis_lanceolata_Cl_chr06_07170T Steroid CAS low borderline
codonopsis_lanceolata_Cl_chr06_19010T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr06_21600T Steroid CAS low borderline
codonopsis_lanceolata_Cl_chr06_41780T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr07_03730T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr07_03750T Steroid CAS low borderline
codonopsis_lanceolata_Cl_chr07_03860T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr07_03880T Steroid CAS low borderline
codonopsis_lanceolata_Cl_chr07_03930T Steroid CAS low borderline
codonopsis_lanceolata_Cl_chr07_03940T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr07_06070T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr07_10150T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr07_10160T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr07_27100T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr07_35770T Steroid CAS low borderline
codonopsis_lanceolata_Cl_chr07_36480T Steroid CAS low borderline
codonopsis_lanceolata_Cl_chr08_00660T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr08_07160T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr08_10050T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr08_10060T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr08_10070T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr08_16100T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr08_16110T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr08_19120T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr08_19140T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr08_19150T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr08_19160T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr08_23330T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr08_23340T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr08_23350T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr08_23360T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr08_23450T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr08_23800T Steroid CAS medium pass
codonopsis_lanceolata_Cl_chr08_23810T Steroid CAS medium pass
codonopsis_lanceolata_Cl_C00609_unscaffolded_00020T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_C16616_unscaffolded_00010T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_C16953_unscaffolded_00010T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_C17567_unscaffolded_00020T Steroid CPD/CYP90A1 low borderline
codonopsis_lanceolata_Cl_C18326_unscaffolded_00020T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_C19597_unscaffolded_00010T Steroid CPD/CYP90A1 medium borderline