PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C3'H/CYP98A
Reset
Gene Pathway Family Confidence Status
GbarA04G0005240 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA04G0005250 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA04G0005260 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA04G0007550 Phenylpropanoid C3'H/CYP98A low borderline
GbarA04G0008480 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA04G0012910 Phenylpropanoid C3'H/CYP98A low borderline
GbarA04G0016830 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA05G0001930 Phenylpropanoid C3'H/CYP98A low borderline
GbarA05G0004200 Phenylpropanoid C3'H/CYP98A low borderline
GbarA05G0006460 Phenylpropanoid C3'H/CYP98A low borderline
GbarA05G0006910 Phenylpropanoid C3'H/CYP98A medium pass
GbarA05G0008410 Phenylpropanoid C3'H/CYP98A low borderline
GbarA05G0009010 Phenylpropanoid C3'H/CYP98A low borderline
GbarA05G0009810 Phenylpropanoid C3'H/CYP98A low borderline
GbarA05G0011040 Phenylpropanoid C3'H/CYP98A low borderline
GbarA05G0011620 Phenylpropanoid C3'H/CYP98A low borderline
GbarA05G0013640 Phenylpropanoid C3'H/CYP98A low borderline
GbarA05G0015010 Phenylpropanoid C3'H/CYP98A low borderline
GbarA05G0018780 Phenylpropanoid C3'H/CYP98A medium pass
GbarA05G0019520 Phenylpropanoid C3'H/CYP98A low borderline
GbarA05G0019530 Phenylpropanoid C3'H/CYP98A low borderline
GbarA05G0019760 Phenylpropanoid C3'H/CYP98A low borderline
GbarA05G0019770 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA05G0019820 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA05G0019830 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA05G0019900 Phenylpropanoid C3'H/CYP98A low borderline
GbarA05G0020320 Phenylpropanoid C3'H/CYP98A low borderline
GbarA05G0020760 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA05G0020770 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA05G0020820 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA05G0026160 Phenylpropanoid C3'H/CYP98A low borderline
GbarA05G0026400 Phenylpropanoid C3'H/CYP98A high pass
GbarA05G0028060 Phenylpropanoid C3'H/CYP98A low borderline
GbarA05G0029610 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA05G0029620 Phenylpropanoid C3'H/CYP98A medium pass
GbarA05G0029630 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA05G0031940 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA05G0035490 Phenylpropanoid C3'H/CYP98A low borderline
GbarA05G0037390 Phenylpropanoid C3'H/CYP98A low borderline
GbarA05G0039890 Phenylpropanoid C3'H/CYP98A low borderline
GbarA05G0041570 Phenylpropanoid C3'H/CYP98A low borderline
GbarA05G0041710 Phenylpropanoid C3'H/CYP98A low borderline
GbarA05G0041730 Phenylpropanoid C3'H/CYP98A low borderline
GbarA05G0042530 Phenylpropanoid C3'H/CYP98A low borderline
GbarA06G0000750 Phenylpropanoid C3'H/CYP98A low borderline
GbarA06G0001330 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA06G0001350 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA06G0001360 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA06G0001370 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA06G0001380 Phenylpropanoid C3'H/CYP98A medium pass