PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C3'H/CYP98A
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Gene Pathway Family Confidence Status
GbarA06G0001400 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA06G0001420 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA06G0001470 Phenylpropanoid C3'H/CYP98A low borderline
GbarA06G0006270 Phenylpropanoid C3'H/CYP98A low borderline
GbarA06G0008390 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA06G0012840 Phenylpropanoid C3'H/CYP98A medium pass
GbarA06G0017170 Phenylpropanoid C3'H/CYP98A medium pass
GbarA06G0018250 Phenylpropanoid C3'H/CYP98A low borderline
GbarA06G0018900 Phenylpropanoid C3'H/CYP98A low borderline
GbarA06G0020360 Phenylpropanoid C3'H/CYP98A low borderline
GbarA06G0020640 Phenylpropanoid C3'H/CYP98A low borderline
GbarA06G0023340 Phenylpropanoid C3'H/CYP98A medium pass
GbarA07G0000230 Phenylpropanoid C3'H/CYP98A low borderline
GbarA07G0001290 Phenylpropanoid C3'H/CYP98A low borderline
GbarA07G0004590 Phenylpropanoid C3'H/CYP98A low borderline
GbarA07G0005720 Phenylpropanoid C3'H/CYP98A low borderline
GbarA07G0006230 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA07G0008630 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA07G0008660 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA07G0008780 Phenylpropanoid C3'H/CYP98A low borderline
GbarA07G0010210 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA07G0010890 Phenylpropanoid C3'H/CYP98A low borderline
GbarA07G0011290 Phenylpropanoid C3'H/CYP98A low borderline
GbarA07G0013180 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA07G0013910 Phenylpropanoid C3'H/CYP98A low borderline
GbarA07G0017300 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA07G0020010 Phenylpropanoid C3'H/CYP98A low borderline
GbarA07G0020120 Phenylpropanoid C3'H/CYP98A low borderline
GbarA07G0020500 Phenylpropanoid C3'H/CYP98A low borderline
GbarA07G0021920 Phenylpropanoid C3'H/CYP98A medium pass
GbarA07G0023130 Phenylpropanoid C3'H/CYP98A low borderline
GbarA07G0023290 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA07G0023780 Phenylpropanoid C3'H/CYP98A low borderline
GbarA07G0023790 Phenylpropanoid C3'H/CYP98A low borderline
GbarA08G0000820 Phenylpropanoid C3'H/CYP98A low borderline
GbarA08G0001870 Phenylpropanoid C3'H/CYP98A low borderline
GbarA08G0015410 Phenylpropanoid C3'H/CYP98A low borderline
GbarA08G0015790 Phenylpropanoid C3'H/CYP98A low borderline
GbarA08G0017460 Phenylpropanoid C3'H/CYP98A low borderline
GbarA08G0018410 Phenylpropanoid C3'H/CYP98A low borderline
GbarA08G0018420 Phenylpropanoid C3'H/CYP98A low borderline
GbarA08G0018430 Phenylpropanoid C3'H/CYP98A low borderline
GbarA08G0019820 Phenylpropanoid C3'H/CYP98A high pass
GbarA08G0020130 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA08G0020160 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA08G0020180 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA08G0020230 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA08G0020950 Phenylpropanoid C3'H/CYP98A low borderline
GbarA08G0021520 Phenylpropanoid C3'H/CYP98A low borderline
GbarA08G0025080 Phenylpropanoid C3'H/CYP98A low borderline