PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
GbarA01G0011560 Rosmarinic Acid C4H low borderline
GbarA01G0017490 Rosmarinic Acid C4H low borderline
GbarA01G0019520 Rosmarinic Acid C4H low borderline
GbarA01G0021190 Rosmarinic Acid C4H medium pass
GbarA01G0021200 Rosmarinic Acid C4H medium pass
GbarA01G0021210 Rosmarinic Acid C4H medium pass
GbarA01G0021420 Rosmarinic Acid C4H medium pass
GbarA01G0022470 Rosmarinic Acid C4H low borderline
GbarA02G0000510 Rosmarinic Acid C4H medium pass
GbarA02G0002470 Rosmarinic Acid C4H low borderline
GbarA02G0002480 Rosmarinic Acid C4H low borderline
GbarA02G0002490 Rosmarinic Acid C4H low borderline
GbarA02G0002500 Rosmarinic Acid C4H low borderline
GbarA02G0002530 Rosmarinic Acid C4H low borderline
GbarA02G0002540 Rosmarinic Acid C4H low borderline
GbarA02G0002550 Rosmarinic Acid C4H low borderline
GbarA02G0002560 Rosmarinic Acid C4H low borderline
GbarA02G0002570 Rosmarinic Acid C4H low borderline
GbarA02G0006960 Rosmarinic Acid C4H low borderline
GbarA02G0009000 Rosmarinic Acid C4H medium pass
GbarA02G0009030 Rosmarinic Acid C4H medium pass
GbarA02G0010880 Rosmarinic Acid C4H low borderline
GbarA02G0013670 Rosmarinic Acid C4H low borderline
GbarA02G0016010 Rosmarinic Acid C4H low borderline
GbarA02G0016480 Rosmarinic Acid C4H medium pass
GbarA02G0017980 Rosmarinic Acid C4H low borderline
GbarA02G0018280 Rosmarinic Acid C4H medium pass
GbarA02G0018290 Rosmarinic Acid C4H low borderline
GbarA02G0019470 Rosmarinic Acid C4H low borderline
GbarA03G0001930 Rosmarinic Acid C4H low borderline
GbarA03G0001940 Rosmarinic Acid C4H low borderline
GbarA03G0001950 Rosmarinic Acid C4H low borderline
GbarA03G0001970 Rosmarinic Acid C4H low borderline
GbarA03G0001980 Rosmarinic Acid C4H low borderline
GbarA03G0005600 Rosmarinic Acid C4H low borderline
GbarA03G0008940 Rosmarinic Acid C4H low borderline
GbarA03G0008970 Rosmarinic Acid C4H low borderline
GbarA03G0012330 Rosmarinic Acid C4H low borderline
GbarA04G0001870 Rosmarinic Acid C4H low borderline
GbarA04G0001900 Rosmarinic Acid C4H low borderline
GbarA04G0001920 Rosmarinic Acid C4H low borderline
GbarA04G0005230 Rosmarinic Acid C4H medium pass
GbarA04G0005240 Rosmarinic Acid C4H medium pass
GbarA04G0005250 Rosmarinic Acid C4H medium pass
GbarA04G0005260 Rosmarinic Acid C4H medium pass
GbarA04G0008480 Rosmarinic Acid C4H low borderline
GbarA04G0008490 Rosmarinic Acid C4H low borderline
GbarA04G0015670 Rosmarinic Acid C4H low borderline
GbarA04G0015680 Rosmarinic Acid C4H low borderline
GbarA04G0016830 Rosmarinic Acid C4H low borderline