PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COMT
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Gene Pathway Family Confidence Status
GbarD05G0007130 Phenylpropanoid COMT medium pass
GbarD06G0015230 Phenylpropanoid COMT low borderline
GbarD07G0008890 Phenylpropanoid COMT low borderline
GbarD07G0017770 Phenylpropanoid COMT medium pass
GbarD07G0017780 Phenylpropanoid COMT low borderline
GbarD08G0006930 Phenylpropanoid COMT low borderline
GbarD08G0012190 Phenylpropanoid COMT medium pass
GbarD08G0024760 Phenylpropanoid COMT medium pass
GbarD08G0024770 Phenylpropanoid COMT medium pass
GbarD08G0024790 Phenylpropanoid COMT medium pass
GbarD09G0012390 Phenylpropanoid COMT medium pass
GbarD10G0016250 Phenylpropanoid COMT low borderline
GbarD10G0018530 Phenylpropanoid COMT medium pass
GbarD10G0022010 Phenylpropanoid COMT medium pass
GbarD10G0022020 Phenylpropanoid COMT medium pass
GbarD10G0022070 Phenylpropanoid COMT medium pass
GbarD10G0022800 Phenylpropanoid COMT medium pass
GbarD10G0022820 Phenylpropanoid COMT medium pass
GbarD10G0022840 Phenylpropanoid COMT medium pass
GbarD11G0013360 Phenylpropanoid COMT low borderline
GbarD12G0003650 Phenylpropanoid COMT medium pass
GbarD12G0003660 Phenylpropanoid COMT low borderline
GbarD12G0003670 Phenylpropanoid COMT medium pass
GbarD12G0013570 Phenylpropanoid COMT medium pass
GbarD12G0026360 Phenylpropanoid COMT medium pass
GbarD12G0026370 Phenylpropanoid COMT medium pass
GbarD12G0026380 Phenylpropanoid COMT medium pass
GbarD12G0026780 Phenylpropanoid COMT medium pass
GbarD12G0026800 Phenylpropanoid COMT medium pass
GbarD13G0006100 Phenylpropanoid COMT low borderline
GbarD13G0018540 Phenylpropanoid COMT medium pass
GbarD13G0018550 Phenylpropanoid COMT medium pass
Gbarscaffold1821_obj_D040001510 Phenylpropanoid COMT medium pass
Gbarscaffold239_obj0002430 Phenylpropanoid COMT medium pass