PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status Best Target
GbarD05G0004720 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
GbarD05G0015930 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD05G0015940 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD05G0019260 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD05G0019310 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD05G0020910 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD05G0035720 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD05G0035770 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD05G0035780 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD05G0035810 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD05G0035820 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD05G0035830 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD05G0035850 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD05G0035880 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD05G0035900 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD05G0035910 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD05G0035920 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD05G0035940 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD05G0035950 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD05G0035960 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD06G0001930 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD06G0008180 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD06G0014520 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
GbarD06G0015400 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD06G0015510 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD06G0024270 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
GbarD07G0002730 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD08G0008220 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
GbarD10G0016000 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD10G0024150 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
GbarD11G0012250 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
GbarD11G0020960 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD11G0032960 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD12G0000200 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD12G0001270 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD12G0002260 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD12G0009800 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD12G0016590 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD12G0020650 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD13G0003060 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
GbarD13G0021790 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Gbarscaffold254_obj_D110002770 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Gbarscaffold42177_obj0004870 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL