PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
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Gene Pathway Family Confidence Status
GbarA13G0003790 Steroid CYP90D1 low borderline
GbarA13G0006110 Steroid CYP90D1 low borderline
GbarA13G0006120 Steroid CYP90D1 low borderline
GbarA13G0009250 Steroid CYP90D1 low borderline
GbarA13G0010960 Steroid CYP90D1 low borderline
GbarA13G0013940 Steroid CYP90D1 medium borderline
GbarA13G0014120 Steroid CYP90D1 medium borderline
GbarA13G0018190 Steroid CYP90D1 medium borderline
GbarD01G0005060 Steroid CYP90D1 medium borderline
GbarD01G0007680 Steroid CYP90D1 medium borderline
GbarD01G0008580 Steroid CYP90D1 low borderline
GbarD01G0012080 Steroid CYP90D1 low borderline
GbarD01G0022110 Steroid CYP90D1 low borderline
GbarD01G0022120 Steroid CYP90D1 low borderline
GbarD02G0002720 Steroid CYP90D1 low borderline
GbarD02G0002770 Steroid CYP90D1 low borderline
GbarD02G0002790 Steroid CYP90D1 low borderline
GbarD02G0002800 Steroid CYP90D1 low borderline
GbarD02G0002810 Steroid CYP90D1 low borderline
GbarD02G0007060 Steroid CYP90D1 medium borderline
GbarD02G0007090 Steroid CYP90D1 medium borderline
GbarD04G0002040 Steroid CYP90D1 low borderline
GbarD04G0002050 Steroid CYP90D1 low borderline
GbarD04G0002250 Steroid CYP90D1 low borderline
GbarD04G0011690 Steroid CYP90D1 low borderline
GbarD04G0019090 Steroid CYP90D1 low borderline
GbarD04G0019100 Steroid CYP90D1 low borderline
GbarD04G0019140 Steroid CYP90D1 low borderline
GbarD04G0019220 Steroid CYP90D1 low borderline
GbarD04G0020940 Steroid CYP90D1 low borderline
GbarD04G0020950 Steroid CYP90D1 low borderline
GbarD05G0001960 Steroid CYP90D1 low borderline
GbarD05G0006430 Steroid CYP90D1 low borderline
GbarD05G0019920 Steroid CYP90D1 low borderline
GbarD05G0020190 Steroid CYP90D1 low borderline
GbarD05G0035290 Steroid CYP90D1 low borderline
GbarD06G0001160 Steroid CYP90D1 low borderline
GbarD06G0019160 Steroid CYP90D1 medium borderline
GbarD06G0021040 Steroid CYP90D1 medium borderline
GbarD07G0006230 Steroid CYP90D1 low borderline
GbarD07G0010050 Steroid CYP90D1 low borderline
GbarD07G0010070 Steroid CYP90D1 low borderline
GbarD07G0010080 Steroid CYP90D1 low borderline
GbarD07G0020690 Steroid CYP90D1 low borderline
GbarD08G0020310 Steroid CYP90D1 low borderline
GbarD08G0020320 Steroid CYP90D1 low borderline
GbarD08G0027260 Steroid CYP90D1 low borderline
GbarD09G0013680 Steroid CYP90D1 low borderline
GbarD09G0013710 Steroid CYP90D1 low borderline
GbarD10G0001430 Steroid CYP90D1 medium borderline