PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
GbarA08G0025080 Steroid DWF4/CYP90B1 low borderline
GbarA09G0005150 Steroid DWF4/CYP90B1 low borderline
GbarA09G0008570 Steroid DWF4/CYP90B1 low borderline
GbarA09G0019640 Steroid DWF4/CYP90B1 low borderline
GbarA09G0020940 Steroid DWF4/CYP90B1 low borderline
GbarA09G0020960 Steroid DWF4/CYP90B1 low borderline
GbarA09G0022320 Steroid DWF4/CYP90B1 low borderline
GbarA10G0001370 Steroid DWF4/CYP90B1 low borderline
GbarA10G0021100 Steroid DWF4/CYP90B1 low borderline
GbarA10G0021110 Steroid DWF4/CYP90B1 low borderline
GbarA10G0021130 Steroid DWF4/CYP90B1 low borderline
GbarA10G0021140 Steroid DWF4/CYP90B1 low borderline
GbarA10G0021150 Steroid DWF4/CYP90B1 low borderline
GbarA10G0021690 Steroid DWF4/CYP90B1 low borderline
GbarA10G0021850 Steroid DWF4/CYP90B1 low borderline
GbarA10G0021860 Steroid DWF4/CYP90B1 low borderline
GbarA10G0023680 Steroid DWF4/CYP90B1 low borderline
GbarA11G0003780 Steroid DWF4/CYP90B1 low borderline
GbarA11G0008480 Steroid DWF4/CYP90B1 low borderline
GbarA11G0008490 Steroid DWF4/CYP90B1 low borderline
GbarA11G0008500 Steroid DWF4/CYP90B1 low borderline
GbarA11G0015410 Steroid DWF4/CYP90B1 medium borderline
GbarA11G0017000 Steroid DWF4/CYP90B1 low borderline
GbarA11G0019710 Steroid DWF4/CYP90B1 low borderline
GbarA11G0023340 Steroid DWF4/CYP90B1 low borderline
GbarA11G0023360 Steroid DWF4/CYP90B1 low borderline
GbarA11G0034490 Steroid DWF4/CYP90B1 low borderline
GbarA11G0034510 Steroid DWF4/CYP90B1 low borderline
GbarA11G0036790 Steroid DWF4/CYP90B1 low borderline
GbarA12G0005340 Steroid DWF4/CYP90B1 low borderline
GbarA12G0005620 Steroid DWF4/CYP90B1 low borderline
GbarA12G0007980 Steroid DWF4/CYP90B1 low borderline
GbarA12G0008000 Steroid DWF4/CYP90B1 low borderline
GbarA12G0018350 Steroid DWF4/CYP90B1 low borderline
GbarA12G0020120 Steroid DWF4/CYP90B1 low borderline
GbarA12G0027700 Steroid DWF4/CYP90B1 low borderline
GbarA12G0027950 Steroid DWF4/CYP90B1 medium borderline
GbarA12G0028450 Steroid DWF4/CYP90B1 low borderline
GbarA13G0002330 Steroid DWF4/CYP90B1 low borderline
GbarA13G0002350 Steroid DWF4/CYP90B1 low borderline
GbarA13G0008610 Steroid DWF4/CYP90B1 medium borderline
GbarA13G0014500 Steroid DWF4/CYP90B1 low borderline
GbarA13G0022760 Steroid DWF4/CYP90B1 low borderline
GbarD01G0008590 Steroid DWF4/CYP90B1 low borderline
GbarD01G0008610 Steroid DWF4/CYP90B1 low borderline
GbarD01G0008670 Steroid DWF4/CYP90B1 low borderline
GbarD01G0022130 Steroid DWF4/CYP90B1 low borderline
GbarD02G0009150 Steroid DWF4/CYP90B1 low borderline
GbarD02G0017110 Steroid DWF4/CYP90B1 low borderline
GbarD02G0017150 Steroid DWF4/CYP90B1 low borderline