PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
GbarD03G0002290 Steroid DWF4/CYP90B1 low borderline
GbarD03G0002320 Steroid DWF4/CYP90B1 low borderline
GbarD03G0002330 Steroid DWF4/CYP90B1 low borderline
GbarD03G0002610 Steroid DWF4/CYP90B1 low borderline
GbarD03G0005200 Steroid DWF4/CYP90B1 low borderline
GbarD03G0005860 Steroid DWF4/CYP90B1 low borderline
GbarD03G0011670 Steroid DWF4/CYP90B1 low borderline
GbarD03G0013010 Steroid DWF4/CYP90B1 low borderline
GbarD03G0014060 Steroid DWF4/CYP90B1 medium borderline
GbarD03G0017360 Steroid DWF4/CYP90B1 medium borderline
GbarD03G0017670 Steroid DWF4/CYP90B1 low borderline
GbarD03G0017690 Steroid DWF4/CYP90B1 low borderline
GbarD03G0017720 Steroid DWF4/CYP90B1 low borderline
GbarD03G0017760 Steroid DWF4/CYP90B1 low borderline
GbarD03G0017780 Steroid DWF4/CYP90B1 low borderline
GbarD04G0001210 Steroid DWF4/CYP90B1 medium borderline
GbarD04G0003850 Steroid DWF4/CYP90B1 medium borderline
GbarD04G0006120 Steroid DWF4/CYP90B1 medium borderline
GbarD04G0011280 Steroid DWF4/CYP90B1 low borderline
GbarD05G0003380 Steroid DWF4/CYP90B1 low borderline
GbarD05G0006910 Steroid DWF4/CYP90B1 low borderline
GbarD05G0011620 Steroid DWF4/CYP90B1 medium borderline
GbarD05G0019930 Steroid DWF4/CYP90B1 medium borderline
GbarD05G0020150 Steroid DWF4/CYP90B1 low borderline
GbarD05G0020180 Steroid DWF4/CYP90B1 low borderline
GbarD05G0021080 Steroid DWF4/CYP90B1 low borderline
GbarD05G0026620 Steroid DWF4/CYP90B1 low borderline
GbarD05G0029810 Steroid DWF4/CYP90B1 low borderline
GbarD06G0001250 Steroid DWF4/CYP90B1 low borderline
GbarD06G0002110 Steroid DWF4/CYP90B1 low borderline
GbarD06G0016130 Steroid DWF4/CYP90B1 low borderline
GbarD06G0023690 Steroid DWF4/CYP90B1 low borderline
GbarD07G0004620 Steroid DWF4/CYP90B1 low borderline
GbarD07G0008650 Steroid DWF4/CYP90B1 low borderline
GbarD07G0008660 Steroid DWF4/CYP90B1 low borderline
GbarD07G0010760 Steroid DWF4/CYP90B1 medium borderline
GbarD07G0013020 Steroid DWF4/CYP90B1 low borderline
GbarD07G0019970 Steroid DWF4/CYP90B1 medium borderline
GbarD07G0020050 Steroid DWF4/CYP90B1 medium borderline
GbarD07G0020400 Steroid DWF4/CYP90B1 low borderline
GbarD07G0023210 Steroid DWF4/CYP90B1 low borderline
GbarD08G0001940 Steroid DWF4/CYP90B1 medium borderline
GbarD08G0015610 Steroid DWF4/CYP90B1 low borderline
GbarD08G0018590 Steroid DWF4/CYP90B1 medium borderline
GbarD08G0018600 Steroid DWF4/CYP90B1 medium borderline
GbarD08G0020300 Steroid DWF4/CYP90B1 low borderline
GbarD09G0003360 Steroid DWF4/CYP90B1 low borderline
GbarD09G0004260 Steroid DWF4/CYP90B1 low borderline
GbarD09G0005830 Steroid DWF4/CYP90B1 low borderline
GbarD09G0015150 Steroid DWF4/CYP90B1 low borderline