PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
GbarA01G0000320 Flavonoid F3H medium borderline
GbarA01G0000600 Flavonoid F3H medium borderline
GbarA01G0000610 Flavonoid F3H medium borderline
GbarA01G0003110 Flavonoid F3H medium borderline
GbarA01G0003520 Flavonoid F3H medium borderline
GbarA01G0003530 Flavonoid F3H medium borderline
GbarA01G0003540 Flavonoid F3H medium borderline
GbarA01G0003550 Flavonoid F3H medium borderline
GbarA01G0003580 Flavonoid F3H medium borderline
GbarA01G0003590 Flavonoid F3H medium borderline
GbarA01G0003600 Flavonoid F3H medium borderline
GbarA01G0004180 Flavonoid F3H medium borderline
GbarA01G0005740 Flavonoid F3H medium borderline
GbarA01G0013730 Flavonoid F3H medium borderline
GbarA01G0023400 Flavonoid F3H medium borderline
GbarA01G0024570 Flavonoid F3H medium borderline
GbarA02G0003440 Flavonoid F3H medium pass
GbarA02G0003960 Flavonoid F3H medium borderline
GbarA02G0003970 Flavonoid F3H medium borderline
GbarA02G0003980 Flavonoid F3H medium borderline
GbarA02G0004000 Flavonoid F3H medium borderline
GbarA02G0004020 Flavonoid F3H medium borderline
GbarA02G0004030 Flavonoid F3H medium borderline
GbarA02G0004590 Flavonoid F3H low borderline
GbarA02G0007750 Flavonoid F3H medium borderline
GbarA02G0007760 Flavonoid F3H medium borderline
GbarA02G0012620 Flavonoid F3H medium borderline
GbarA02G0014390 Flavonoid F3H low borderline
GbarA02G0014690 Flavonoid F3H low borderline
GbarA02G0014930 Flavonoid F3H medium pass
GbarA02G0018090 Flavonoid F3H low borderline
GbarA03G0012960 Flavonoid F3H medium borderline
GbarA03G0013870 Flavonoid F3H medium borderline
GbarA04G0002550 Flavonoid F3H low borderline
GbarA04G0002560 Flavonoid F3H low borderline
GbarA04G0002580 Flavonoid F3H low borderline
GbarA04G0002610 Flavonoid F3H low borderline
GbarA04G0002620 Flavonoid F3H low borderline
GbarA04G0002640 Flavonoid F3H low borderline
GbarA04G0002650 Flavonoid F3H low borderline
GbarA04G0002680 Flavonoid F3H low borderline
GbarA04G0002690 Flavonoid F3H low borderline
GbarA04G0002720 Flavonoid F3H low borderline
GbarA04G0008710 Flavonoid F3H medium borderline
GbarA04G0010250 Flavonoid F3H medium borderline
GbarA05G0001310 Flavonoid F3H low borderline
GbarA05G0001320 Flavonoid F3H medium borderline
GbarA05G0008820 Flavonoid F3H low borderline
GbarA05G0013400 Flavonoid F3H low borderline
GbarA05G0016880 Flavonoid F3H medium borderline