PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
GbarA05G0017440 Flavonoid F3H medium borderline
GbarA05G0022250 Flavonoid F3H medium borderline
GbarA05G0023280 Flavonoid F3H medium borderline
GbarA05G0023910 Flavonoid F3H medium pass
GbarA05G0034500 Flavonoid F3H medium borderline
GbarA05G0036740 Flavonoid F3H medium borderline
GbarA05G0036750 Flavonoid F3H medium borderline
GbarA05G0036760 Flavonoid F3H medium borderline
GbarA05G0041390 Flavonoid F3H medium borderline
GbarA05G0041400 Flavonoid F3H medium borderline
GbarA06G0005530 Flavonoid F3H medium borderline
GbarA06G0005540 Flavonoid F3H medium borderline
GbarA06G0005550 Flavonoid F3H medium borderline
GbarA06G0005660 Flavonoid F3H medium borderline
GbarA06G0007210 Flavonoid F3H low borderline
GbarA06G0017710 Flavonoid F3H medium borderline
GbarA06G0017980 Flavonoid F3H low borderline
GbarA06G0021500 Flavonoid F3H medium borderline
GbarA06G0022440 Flavonoid F3H medium borderline
GbarA07G0001120 Flavonoid F3H medium borderline
GbarA07G0004430 Flavonoid F3H medium borderline
GbarA07G0004640 Flavonoid F3H medium borderline
GbarA07G0005040 Flavonoid F3H medium borderline
GbarA07G0007170 Flavonoid F3H medium borderline
GbarA07G0009350 Flavonoid F3H medium borderline
GbarA07G0015740 Flavonoid F3H medium borderline
GbarA07G0020400 Flavonoid F3H low borderline
GbarA07G0020900 Flavonoid F3H medium borderline
GbarA07G0023910 Flavonoid F3H medium borderline
GbarA07G0023940 Flavonoid F3H medium borderline
GbarA07G0023950 Flavonoid F3H medium borderline
GbarA08G0000650 Flavonoid F3H medium borderline
GbarA08G0000660 Flavonoid F3H medium borderline
GbarA08G0004410 Flavonoid F3H medium borderline
GbarA08G0005630 Flavonoid F3H medium borderline
GbarA08G0006650 Flavonoid F3H medium borderline
GbarA08G0009970 Flavonoid F3H low borderline
GbarA08G0012910 Flavonoid F3H medium borderline
GbarA08G0013230 Flavonoid F3H medium borderline
GbarA08G0018500 Flavonoid F3H medium borderline
GbarA08G0019280 Flavonoid F3H low borderline
GbarA08G0020260 Flavonoid F3H medium borderline
GbarA08G0021630 Flavonoid F3H low borderline
GbarA08G0021640 Flavonoid F3H medium borderline
GbarA08G0021650 Flavonoid F3H medium borderline
GbarA08G0021660 Flavonoid F3H medium borderline
GbarA08G0021690 Flavonoid F3H medium borderline
GbarA08G0025370 Flavonoid F3H medium borderline
GbarA08G0025380 Flavonoid F3H medium borderline
GbarA08G0025390 Flavonoid F3H medium borderline