PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
GbarA08G0027360 Flavonoid F3H medium borderline
GbarA09G0000490 Flavonoid F3H medium borderline
GbarA09G0004690 Flavonoid F3H medium borderline
GbarA09G0007670 Flavonoid F3H medium borderline
GbarA09G0007680 Flavonoid F3H medium borderline
GbarA09G0007690 Flavonoid F3H medium borderline
GbarA09G0007700 Flavonoid F3H medium borderline
GbarA09G0010310 Flavonoid F3H low borderline
GbarA09G0010710 Flavonoid F3H low borderline
GbarA09G0012490 Flavonoid F3H medium borderline
GbarA09G0016070 Flavonoid F3H medium borderline
GbarA09G0018150 Flavonoid F3H medium borderline
GbarA09G0019420 Flavonoid F3H medium borderline
GbarA09G0024620 Flavonoid F3H medium borderline
GbarA09G0024640 Flavonoid F3H medium borderline
GbarA09G0024650 Flavonoid F3H medium borderline
GbarA09G0024660 Flavonoid F3H medium borderline
GbarA09G0024670 Flavonoid F3H medium borderline
GbarA09G0024690 Flavonoid F3H medium borderline
GbarA09G0026300 Flavonoid F3H medium borderline
GbarA10G0000760 Flavonoid F3H low borderline
GbarA10G0001480 Flavonoid F3H medium borderline
GbarA10G0001820 Flavonoid F3H low borderline
GbarA10G0003370 Flavonoid F3H medium borderline
GbarA10G0003380 Flavonoid F3H medium borderline
GbarA10G0006500 Flavonoid F3H low borderline
GbarA10G0007820 Flavonoid F3H low borderline
GbarA10G0007830 Flavonoid F3H low borderline
GbarA10G0007840 Flavonoid F3H low borderline
GbarA10G0007850 Flavonoid F3H low borderline
GbarA10G0009150 Flavonoid F3H low borderline
GbarA10G0017770 Flavonoid F3H medium borderline
GbarA10G0024500 Flavonoid F3H medium borderline
GbarA10G0026260 Flavonoid F3H medium borderline
GbarA11G0002150 Flavonoid F3H medium pass
GbarA11G0004250 Flavonoid F3H low borderline
GbarA11G0008570 Flavonoid F3H medium borderline
GbarA11G0010610 Flavonoid F3H medium borderline
GbarA11G0013430 Flavonoid F3H medium borderline
GbarA11G0013530 Flavonoid F3H medium borderline
GbarA11G0015990 Flavonoid F3H medium borderline
GbarA11G0018360 Flavonoid F3H medium borderline
GbarA11G0026430 Flavonoid F3H low borderline
GbarA11G0026700 Flavonoid F3H low borderline
GbarA11G0026720 Flavonoid F3H low borderline
GbarA11G0033190 Flavonoid F3H medium borderline
GbarA12G0005960 Flavonoid F3H medium borderline
GbarA12G0011350 Flavonoid F3H medium borderline
GbarA12G0013970 Flavonoid F3H medium borderline
GbarA12G0023050 Flavonoid F3H medium borderline