PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
GbarA12G0023060 Flavonoid F3H medium borderline
GbarA12G0023090 Flavonoid F3H medium borderline
GbarA12G0024410 Flavonoid F3H medium borderline
GbarA12G0026570 Flavonoid F3H medium borderline
GbarA13G0002640 Flavonoid F3H medium borderline
GbarA13G0005170 Flavonoid F3H medium borderline
GbarA13G0007300 Flavonoid F3H medium borderline
GbarA13G0007320 Flavonoid F3H medium borderline
GbarA13G0007330 Flavonoid F3H medium borderline
GbarA13G0012240 Flavonoid F3H medium borderline
GbarA13G0017860 Flavonoid F3H medium borderline
GbarA13G0017940 Flavonoid F3H medium borderline
GbarA13G0017950 Flavonoid F3H medium borderline
GbarA13G0018070 Flavonoid F3H medium borderline
GbarA13G0018260 Flavonoid F3H medium borderline
GbarA13G0018270 Flavonoid F3H medium borderline
GbarA13G0018280 Flavonoid F3H medium borderline
GbarA13G0022480 Flavonoid F3H low borderline
GbarA13G0023200 Flavonoid F3H low borderline
GbarA13G0023210 Flavonoid F3H low borderline
GbarA13G0023220 Flavonoid F3H low borderline
GbarA13G0023230 Flavonoid F3H low borderline
GbarA13G0023240 Flavonoid F3H low borderline
GbarA13G0023260 Flavonoid F3H low borderline
GbarA13G0023270 Flavonoid F3H low borderline
GbarA13G0023310 Flavonoid F3H low borderline
GbarA13G0023330 Flavonoid F3H low borderline
GbarA13G0023360 Flavonoid F3H low borderline
GbarA13G0023390 Flavonoid F3H low borderline
GbarA13G0023400 Flavonoid F3H low borderline
GbarA13G0023410 Flavonoid F3H low borderline
GbarA13G0023420 Flavonoid F3H low borderline
GbarA13G0024050 Flavonoid F3H medium borderline
GbarD01G0000320 Flavonoid F3H medium borderline
GbarD01G0000570 Flavonoid F3H medium borderline
GbarD01G0000580 Flavonoid F3H medium borderline
GbarD01G0002950 Flavonoid F3H medium borderline
GbarD01G0003350 Flavonoid F3H medium borderline
GbarD01G0003370 Flavonoid F3H medium borderline
GbarD01G0003380 Flavonoid F3H medium borderline
GbarD01G0003400 Flavonoid F3H medium borderline
GbarD01G0003410 Flavonoid F3H medium borderline
GbarD01G0004080 Flavonoid F3H medium borderline
GbarD01G0004090 Flavonoid F3H medium borderline
GbarD01G0005610 Flavonoid F3H medium borderline
GbarD01G0014530 Flavonoid F3H medium borderline
GbarD01G0014560 Flavonoid F3H medium borderline
GbarD01G0024180 Flavonoid F3H medium borderline
GbarD01G0025330 Flavonoid F3H medium borderline
GbarD02G0004170 Flavonoid F3H medium borderline