PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Protein/Isoform Record Pathway Family Confidence Status
GbarD02G0004700 Flavonoid F3H medium borderline
GbarD02G0004730 Flavonoid F3H medium borderline
GbarD02G0007920 Flavonoid F3H medium borderline
GbarD02G0007940 Flavonoid F3H medium borderline
GbarD02G0014840 Flavonoid F3H medium borderline
GbarD02G0015420 Flavonoid F3H medium borderline
GbarD03G0002500 Flavonoid F3H low borderline
GbarD03G0007160 Flavonoid F3H medium borderline
GbarD03G0007700 Flavonoid F3H low borderline
GbarD03G0007740 Flavonoid F3H low borderline
GbarD03G0008370 Flavonoid F3H medium pass
GbarD03G0008380 Flavonoid F3H medium borderline
GbarD04G0002390 Flavonoid F3H medium borderline
GbarD04G0002400 Flavonoid F3H medium borderline
GbarD04G0006670 Flavonoid F3H medium borderline
GbarD04G0006690 Flavonoid F3H medium borderline
GbarD04G0007110 Flavonoid F3H medium borderline
GbarD04G0011900 Flavonoid F3H medium borderline
GbarD04G0013560 Flavonoid F3H medium borderline
GbarD05G0008740 Flavonoid F3H medium borderline
GbarD05G0017190 Flavonoid F3H medium borderline
GbarD05G0017750 Flavonoid F3H medium borderline
GbarD05G0022510 Flavonoid F3H medium borderline
GbarD05G0023500 Flavonoid F3H medium borderline
GbarD05G0024100 Flavonoid F3H medium pass
GbarD05G0038140 Flavonoid F3H low borderline
GbarD05G0038150 Flavonoid F3H low borderline
GbarD06G0005340 Flavonoid F3H medium borderline
GbarD06G0006980 Flavonoid F3H low borderline
GbarD06G0018280 Flavonoid F3H low borderline
GbarD06G0021840 Flavonoid F3H medium borderline
GbarD06G0022830 Flavonoid F3H medium borderline
GbarD07G0001190 Flavonoid F3H medium borderline
GbarD07G0004450 Flavonoid F3H medium borderline
GbarD07G0004650 Flavonoid F3H medium borderline
GbarD07G0005080 Flavonoid F3H medium borderline
GbarD07G0007030 Flavonoid F3H medium borderline
GbarD07G0009380 Flavonoid F3H medium borderline
GbarD07G0015810 Flavonoid F3H medium pass
GbarD07G0015830 Flavonoid F3H medium borderline
GbarD07G0018680 Flavonoid F3H low borderline
GbarD07G0020320 Flavonoid F3H low borderline
GbarD07G0020700 Flavonoid F3H medium borderline
GbarD07G0023370 Flavonoid F3H medium borderline
GbarD07G0023380 Flavonoid F3H medium borderline
GbarD08G0004600 Flavonoid F3H medium borderline
GbarD08G0005630 Flavonoid F3H medium borderline
GbarD08G0006640 Flavonoid F3H medium borderline
GbarD08G0010130 Flavonoid F3H medium borderline
GbarD08G0012160 Flavonoid F3H medium borderline