PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
Reset
Protein/Isoform Record Pathway Family Confidence Status
GbarD08G0012590 Flavonoid F3H medium borderline
GbarD08G0018670 Flavonoid F3H medium borderline
GbarD08G0019390 Flavonoid F3H low borderline
GbarD08G0019400 Flavonoid F3H medium pass
GbarD08G0019410 Flavonoid F3H medium pass
GbarD08G0020390 Flavonoid F3H medium borderline
GbarD08G0021830 Flavonoid F3H medium borderline
GbarD08G0021840 Flavonoid F3H medium borderline
GbarD08G0021850 Flavonoid F3H medium borderline
GbarD08G0021860 Flavonoid F3H medium borderline
GbarD08G0025410 Flavonoid F3H medium borderline
GbarD08G0027320 Flavonoid F3H medium borderline
GbarD09G0000050 Flavonoid F3H medium borderline
GbarD09G0000530 Flavonoid F3H medium borderline
GbarD09G0005320 Flavonoid F3H medium borderline
GbarD09G0007050 Flavonoid F3H medium borderline
GbarD09G0007060 Flavonoid F3H medium borderline
GbarD09G0007080 Flavonoid F3H medium borderline
GbarD09G0007090 Flavonoid F3H medium borderline
GbarD09G0007100 Flavonoid F3H medium borderline
GbarD09G0009800 Flavonoid F3H low borderline
GbarD09G0010230 Flavonoid F3H low borderline
GbarD09G0012070 Flavonoid F3H medium borderline
GbarD09G0015530 Flavonoid F3H medium borderline
GbarD09G0017670 Flavonoid F3H medium borderline
GbarD09G0018960 Flavonoid F3H medium borderline
GbarD09G0023980 Flavonoid F3H medium borderline
GbarD09G0023990 Flavonoid F3H medium borderline
GbarD09G0024000 Flavonoid F3H medium borderline
GbarD09G0024010 Flavonoid F3H medium borderline
GbarD09G0024020 Flavonoid F3H medium borderline
GbarD09G0024030 Flavonoid F3H medium borderline
GbarD09G0025520 Flavonoid F3H medium borderline
GbarD10G0000870 Flavonoid F3H low borderline
GbarD10G0001580 Flavonoid F3H medium borderline
GbarD10G0001890 Flavonoid F3H low borderline
GbarD10G0003500 Flavonoid F3H medium borderline
GbarD10G0003520 Flavonoid F3H medium borderline
GbarD10G0006950 Flavonoid F3H low borderline
GbarD10G0007890 Flavonoid F3H low borderline
GbarD10G0007900 Flavonoid F3H low borderline
GbarD10G0007910 Flavonoid F3H low borderline
GbarD10G0007920 Flavonoid F3H low borderline
GbarD10G0010470 Flavonoid F3H low borderline
GbarD10G0018760 Flavonoid F3H medium borderline
GbarD10G0025590 Flavonoid F3H medium borderline
GbarD10G0027310 Flavonoid F3H medium borderline
GbarD11G0002170 Flavonoid F3H medium pass
GbarD11G0004440 Flavonoid F3H low borderline
GbarD11G0010880 Flavonoid F3H medium borderline