PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Protein/Isoform Record Pathway Family Confidence Status
GbarD11G0013750 Flavonoid F3H medium borderline
GbarD11G0013840 Flavonoid F3H medium borderline
GbarD11G0016310 Flavonoid F3H medium borderline
GbarD11G0018710 Flavonoid F3H medium borderline
GbarD11G0026960 Flavonoid F3H low borderline
GbarD11G0026970 Flavonoid F3H low borderline
GbarD12G0006160 Flavonoid F3H medium borderline
GbarD12G0011320 Flavonoid F3H medium borderline
GbarD12G0014130 Flavonoid F3H medium borderline
GbarD12G0023210 Flavonoid F3H medium borderline
GbarD12G0023230 Flavonoid F3H medium borderline
GbarD12G0024530 Flavonoid F3H medium borderline
GbarD12G0026810 Flavonoid F3H medium borderline
GbarD13G0002610 Flavonoid F3H medium borderline
GbarD13G0005350 Flavonoid F3H medium borderline
GbarD13G0005360 Flavonoid F3H medium borderline
GbarD13G0005370 Flavonoid F3H medium borderline
GbarD13G0011660 Flavonoid F3H medium borderline
GbarD13G0017390 Flavonoid F3H medium borderline
GbarD13G0017490 Flavonoid F3H medium borderline
GbarD13G0017500 Flavonoid F3H medium borderline
GbarD13G0017610 Flavonoid F3H medium borderline
GbarD13G0017620 Flavonoid F3H medium borderline
GbarD13G0022300 Flavonoid F3H low borderline
GbarD13G0023170 Flavonoid F3H low borderline
GbarD13G0023180 Flavonoid F3H low borderline
GbarD13G0023190 Flavonoid F3H low borderline
GbarD13G0023210 Flavonoid F3H low borderline
GbarD13G0023220 Flavonoid F3H low borderline
GbarD13G0023230 Flavonoid F3H low borderline
GbarD13G0023240 Flavonoid F3H low borderline
GbarD13G0023250 Flavonoid F3H low borderline
GbarD13G0023280 Flavonoid F3H low borderline
GbarD13G0023290 Flavonoid F3H low borderline
GbarD13G0023310 Flavonoid F3H low borderline
GbarD13G0023330 Flavonoid F3H medium pass
GbarD13G0024010 Flavonoid F3H medium borderline
Gbarscaffold24413_obj_A080002500 Flavonoid F3H low borderline