PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3'H/CYP75B
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Gene Pathway Family Confidence Status
GbarD04G0002250 Flavonoid F3'H/CYP75B low borderline
GbarD04G0019140 Flavonoid F3'H/CYP75B medium borderline
GbarD04G0019220 Flavonoid F3'H/CYP75B medium borderline
GbarD05G0006430 Flavonoid F3'H/CYP75B low borderline
GbarD05G0010990 Flavonoid F3'H/CYP75B medium borderline
GbarD05G0015250 Flavonoid F3'H/CYP75B low borderline
GbarD05G0019160 Flavonoid F3'H/CYP75B medium borderline
GbarD05G0020150 Flavonoid F3'H/CYP75B medium borderline
GbarD05G0020160 Flavonoid F3'H/CYP75B medium borderline
GbarD05G0032160 Flavonoid F3'H/CYP75B medium borderline
GbarD05G0035310 Flavonoid F3'H/CYP75B medium borderline
GbarD05G0038700 Flavonoid F3'H/CYP75B medium borderline
GbarD05G0038710 Flavonoid F3'H/CYP75B medium borderline
GbarD05G0038720 Flavonoid F3'H/CYP75B medium borderline
GbarD05G0038740 Flavonoid F3'H/CYP75B medium borderline
GbarD06G0001160 Flavonoid F3'H/CYP75B medium borderline
GbarD06G0001180 Flavonoid F3'H/CYP75B medium borderline
GbarD06G0001210 Flavonoid F3'H/CYP75B medium borderline
GbarD06G0001220 Flavonoid F3'H/CYP75B medium borderline
GbarD06G0006000 Flavonoid F3'H/CYP75B low borderline
GbarD06G0012530 Flavonoid F3'H/CYP75B medium borderline
GbarD07G0010070 Flavonoid F3'H/CYP75B medium borderline
GbarD07G0010080 Flavonoid F3'H/CYP75B medium borderline
GbarD07G0017260 Flavonoid F3'H/CYP75B medium borderline
GbarD07G0020050 Flavonoid F3'H/CYP75B low borderline
GbarD07G0020680 Flavonoid F3'H/CYP75B low borderline
GbarD07G0021280 Flavonoid F3'H/CYP75B medium borderline
GbarD07G0023210 Flavonoid F3'H/CYP75B low borderline
GbarD08G0015100 Flavonoid F3'H/CYP75B medium borderline
GbarD08G0020050 Flavonoid F3'H/CYP75B medium borderline
GbarD08G0020300 Flavonoid F3'H/CYP75B medium borderline
GbarD08G0021750 Flavonoid F3'H/CYP75B low borderline
GbarD08G0026590 Flavonoid F3'H/CYP75B low borderline
GbarD08G0027260 Flavonoid F3'H/CYP75B low borderline
GbarD09G0004260 Flavonoid F3'H/CYP75B low borderline
GbarD09G0005830 Flavonoid F3'H/CYP75B medium borderline
GbarD09G0019120 Flavonoid F3'H/CYP75B low borderline
GbarD10G0011300 Flavonoid F3'H/CYP75B medium borderline
GbarD10G0022250 Flavonoid F3'H/CYP75B medium borderline
GbarD10G0026180 Flavonoid F3'H/CYP75B medium borderline
GbarD10G0027220 Flavonoid F3'H/CYP75B medium borderline
GbarD11G0000770 Flavonoid F3'H/CYP75B medium borderline
GbarD11G0000800 Flavonoid F3'H/CYP75B medium borderline
GbarD11G0017390 Flavonoid F3'H/CYP75B low borderline
GbarD11G0023020 Flavonoid F3'H/CYP75B medium borderline
GbarD11G0023990 Flavonoid F3'H/CYP75B medium borderline
GbarD11G0024150 Flavonoid F3'H/CYP75B medium borderline
GbarD11G0025000 Flavonoid F3'H/CYP75B medium borderline
GbarD11G0037080 Flavonoid F3'H/CYP75B medium borderline
GbarD11G0037160 Flavonoid F3'H/CYP75B low borderline