PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
GbarA01G0006260 Alkaloid G8O/G8H medium pass
GbarA01G0008560 Alkaloid G8O/G8H medium borderline
GbarA02G0013670 Alkaloid G8O/G8H medium borderline
GbarA02G0017980 Alkaloid G8O/G8H low borderline
GbarA03G0001940 Alkaloid G8O/G8H medium borderline
GbarA03G0001950 Alkaloid G8O/G8H low borderline
GbarA04G0016830 Alkaloid G8O/G8H medium borderline
GbarA05G0028060 Alkaloid G8O/G8H medium borderline
GbarA05G0029620 Alkaloid G8O/G8H medium borderline
GbarA06G0017170 Alkaloid G8O/G8H medium borderline
GbarA06G0020640 Alkaloid G8O/G8H medium borderline
GbarA06G0023330 Alkaloid G8O/G8H low borderline
GbarA07G0008650 Alkaloid G8O/G8H low borderline
GbarA07G0021910 Alkaloid G8O/G8H medium borderline
GbarA07G0021920 Alkaloid G8O/G8H medium borderline
GbarA07G0021930 Alkaloid G8O/G8H medium borderline
GbarA08G0018420 Alkaloid G8O/G8H medium borderline
GbarA08G0019820 Alkaloid G8O/G8H medium borderline
GbarA08G0020220 Alkaloid G8O/G8H medium pass
GbarA09G0015940 Alkaloid G8O/G8H medium borderline
GbarA09G0020940 Alkaloid G8O/G8H medium borderline
GbarA09G0020950 Alkaloid G8O/G8H medium borderline
GbarA09G0020960 Alkaloid G8O/G8H medium borderline
GbarA09G0020990 Alkaloid G8O/G8H medium borderline
GbarA09G0021010 Alkaloid G8O/G8H medium pass
GbarA10G0013520 Alkaloid G8O/G8H medium borderline
GbarA10G0021860 Alkaloid G8O/G8H medium borderline
GbarA10G0021870 Alkaloid G8O/G8H medium borderline
GbarA11G0023330 Alkaloid G8O/G8H medium pass
GbarA11G0023560 Alkaloid G8O/G8H medium borderline
GbarA11G0034490 Alkaloid G8O/G8H medium borderline
GbarA11G0034510 Alkaloid G8O/G8H medium borderline
GbarA12G0020510 Alkaloid G8O/G8H medium borderline
GbarA13G0011280 Alkaloid G8O/G8H medium borderline
GbarD01G0008720 Alkaloid G8O/G8H medium borderline
GbarD03G0005860 Alkaloid G8O/G8H medium borderline
GbarD03G0017680 Alkaloid G8O/G8H medium borderline
GbarD03G0017710 Alkaloid G8O/G8H medium pass
GbarD03G0017740 Alkaloid G8O/G8H medium borderline
GbarD03G0017770 Alkaloid G8O/G8H medium pass
GbarD05G0026620 Alkaloid G8O/G8H medium borderline
GbarD05G0038700 Alkaloid G8O/G8H medium borderline
GbarD05G0038720 Alkaloid G8O/G8H medium borderline
GbarD05G0038740 Alkaloid G8O/G8H medium borderline
GbarD06G0001160 Alkaloid G8O/G8H medium borderline
GbarD06G0017400 Alkaloid G8O/G8H medium borderline
GbarD06G0021040 Alkaloid G8O/G8H medium borderline
GbarD07G0021280 Alkaloid G8O/G8H medium borderline
GbarD07G0021290 Alkaloid G8O/G8H medium borderline
GbarD08G0018600 Alkaloid G8O/G8H medium borderline