PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
GbarD04G0009750 Alkaloid GS low borderline
GbarD05G0016820 Alkaloid GS low borderline
GbarD05G0016830 Alkaloid GS low borderline
GbarD05G0018770 Alkaloid GS high pass
GbarD05G0028010 Alkaloid GS low borderline
GbarD07G0004930 Alkaloid GS low borderline
GbarD07G0004940 Alkaloid GS low borderline
GbarD07G0009970 Alkaloid GS low borderline
GbarD07G0009980 Alkaloid GS low borderline
GbarD07G0009990 Alkaloid GS low borderline
GbarD07G0010000 Alkaloid GS low borderline
GbarD07G0010010 Alkaloid GS low borderline
GbarD07G0021860 Alkaloid GS low borderline
GbarD07G0021870 Alkaloid GS low borderline
GbarD07G0021880 Alkaloid GS low borderline
GbarD07G0021890 Alkaloid GS low borderline
GbarD07G0024340 Alkaloid GS low borderline
GbarD07G0024370 Alkaloid GS low borderline
GbarD09G0003090 Alkaloid GS low borderline
GbarD09G0004780 Alkaloid GS medium pass
GbarD10G0002250 Alkaloid GS low borderline
GbarD10G0012120 Alkaloid GS medium pass
GbarD10G0013640 Alkaloid GS low borderline
GbarD11G0015380 Alkaloid GS low borderline
GbarD11G0021100 Alkaloid GS high pass
GbarD11G0022430 Alkaloid GS high pass
GbarD11G0022460 Alkaloid GS high pass
GbarD11G0032410 Alkaloid GS high pass
GbarD11G0033650 Alkaloid GS low borderline
GbarD12G0002170 Alkaloid GS high pass
GbarD12G0008060 Alkaloid GS high pass
GbarD12G0008070 Alkaloid GS medium pass
GbarD12G0008080 Alkaloid GS high pass
GbarD12G0026510 Alkaloid GS high pass
GbarD12G0028390 Alkaloid GS medium pass
GbarD13G0000890 Alkaloid GS low borderline