PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
GbarA01G0000320 Alkaloid H6H medium borderline
GbarA01G0000600 Alkaloid H6H medium borderline
GbarA01G0003520 Alkaloid H6H low borderline
GbarA01G0003530 Alkaloid H6H medium pass
GbarA01G0003550 Alkaloid H6H low borderline
GbarA02G0003440 Alkaloid H6H low borderline
GbarA02G0004000 Alkaloid H6H medium borderline
GbarA02G0004010 Alkaloid H6H low borderline
GbarA02G0004020 Alkaloid H6H medium borderline
GbarA02G0004580 Alkaloid H6H low borderline
GbarA02G0013980 Alkaloid H6H low borderline
GbarA02G0014390 Alkaloid H6H low borderline
GbarA02G0014480 Alkaloid H6H low borderline
GbarA02G0014690 Alkaloid H6H low borderline
GbarA02G0018090 Alkaloid H6H low borderline
GbarA04G0002550 Alkaloid H6H low borderline
GbarA04G0002560 Alkaloid H6H low borderline
GbarA04G0002580 Alkaloid H6H low borderline
GbarA04G0002610 Alkaloid H6H medium pass
GbarA04G0002620 Alkaloid H6H medium pass
GbarA04G0002640 Alkaloid H6H low borderline
GbarA04G0002650 Alkaloid H6H low borderline
GbarA04G0002680 Alkaloid H6H low borderline
GbarA04G0002690 Alkaloid H6H low borderline
GbarA04G0002720 Alkaloid H6H low borderline
GbarA04G0008710 Alkaloid H6H medium borderline
GbarA05G0001310 Alkaloid H6H low borderline
GbarA05G0013400 Alkaloid H6H low borderline
GbarA05G0017440 Alkaloid H6H medium borderline
GbarA05G0023910 Alkaloid H6H medium pass
GbarA05G0041390 Alkaloid H6H medium borderline
GbarA05G0041400 Alkaloid H6H medium borderline
GbarA06G0016020 Alkaloid H6H low borderline
GbarA06G0017710 Alkaloid H6H medium borderline
GbarA07G0014090 Alkaloid H6H low borderline
GbarA07G0020400 Alkaloid H6H low borderline
GbarA07G0023940 Alkaloid H6H medium borderline
GbarA07G0023950 Alkaloid H6H medium borderline
GbarA08G0004410 Alkaloid H6H low borderline
GbarA08G0006650 Alkaloid H6H medium borderline
GbarA08G0009970 Alkaloid H6H low borderline
GbarA08G0013230 Alkaloid H6H medium borderline
GbarA08G0021630 Alkaloid H6H medium pass
GbarA08G0021640 Alkaloid H6H high pass
GbarA08G0021650 Alkaloid H6H medium borderline
GbarA08G0021660 Alkaloid H6H medium borderline
GbarA08G0021690 Alkaloid H6H medium borderline
GbarA09G0000490 Alkaloid H6H medium pass
GbarA09G0007670 Alkaloid H6H medium borderline
GbarA09G0007680 Alkaloid H6H medium pass