PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
GbarA09G0010310 Alkaloid H6H low borderline
GbarA09G0018150 Alkaloid H6H medium borderline
GbarA09G0024620 Alkaloid H6H medium borderline
GbarA10G0006500 Alkaloid H6H low borderline
GbarA10G0006620 Alkaloid H6H low borderline
GbarA10G0007820 Alkaloid H6H low borderline
GbarA10G0007830 Alkaloid H6H low borderline
GbarA10G0007840 Alkaloid H6H low borderline
GbarA10G0017770 Alkaloid H6H medium borderline
GbarA11G0002150 Alkaloid H6H low borderline
GbarA11G0004250 Alkaloid H6H low borderline
GbarA11G0010610 Alkaloid H6H medium borderline
GbarA11G0013530 Alkaloid H6H medium borderline
GbarA11G0018360 Alkaloid H6H high pass
GbarA11G0026430 Alkaloid H6H medium borderline
GbarA12G0000270 Alkaloid H6H low borderline
GbarA12G0005960 Alkaloid H6H high pass
GbarA12G0026570 Alkaloid H6H medium borderline
GbarA13G0001530 Alkaloid H6H low borderline
GbarA13G0007330 Alkaloid H6H medium borderline
GbarA13G0023200 Alkaloid H6H low borderline
GbarA13G0023210 Alkaloid H6H low borderline
GbarA13G0023220 Alkaloid H6H low borderline
GbarA13G0023230 Alkaloid H6H low borderline
GbarA13G0023240 Alkaloid H6H low borderline
GbarA13G0023250 Alkaloid H6H low borderline
GbarA13G0023260 Alkaloid H6H low borderline
GbarA13G0023270 Alkaloid H6H low borderline
GbarA13G0023290 Alkaloid H6H low borderline
GbarA13G0023300 Alkaloid H6H low borderline
GbarA13G0023310 Alkaloid H6H low borderline
GbarA13G0023320 Alkaloid H6H low borderline
GbarA13G0023330 Alkaloid H6H low borderline
GbarA13G0023360 Alkaloid H6H low borderline
GbarA13G0023390 Alkaloid H6H low borderline
GbarA13G0023400 Alkaloid H6H low borderline
GbarA13G0023410 Alkaloid H6H low borderline
GbarA13G0023420 Alkaloid H6H low borderline
GbarA13G0024050 Alkaloid H6H medium pass
GbarD01G0000320 Alkaloid H6H medium borderline
GbarD01G0000570 Alkaloid H6H medium borderline
GbarD01G0014560 Alkaloid H6H medium borderline
GbarD03G0002500 Alkaloid H6H low borderline
GbarD03G0006160 Alkaloid H6H low borderline
GbarD03G0007700 Alkaloid H6H low borderline
GbarD03G0007740 Alkaloid H6H low borderline
GbarD04G0002400 Alkaloid H6H medium borderline
GbarD04G0011900 Alkaloid H6H medium borderline
GbarD05G0013430 Alkaloid H6H low borderline
GbarD05G0017750 Alkaloid H6H medium borderline