PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
GbarD05G0024100 Alkaloid H6H medium pass
GbarD05G0038140 Alkaloid H6H low borderline
GbarD05G0038150 Alkaloid H6H low borderline
GbarD06G0016210 Alkaloid H6H low borderline
GbarD07G0013980 Alkaloid H6H low borderline
GbarD07G0015810 Alkaloid H6H low borderline
GbarD07G0020320 Alkaloid H6H low borderline
GbarD07G0020700 Alkaloid H6H medium borderline
GbarD07G0023330 Alkaloid H6H low borderline
GbarD07G0023370 Alkaloid H6H medium borderline
GbarD07G0023380 Alkaloid H6H medium borderline
GbarD08G0004600 Alkaloid H6H medium pass
GbarD08G0005630 Alkaloid H6H medium borderline
GbarD08G0006640 Alkaloid H6H high pass
GbarD08G0010130 Alkaloid H6H medium pass
GbarD08G0012160 Alkaloid H6H medium borderline
GbarD08G0021830 Alkaloid H6H medium borderline
GbarD08G0021840 Alkaloid H6H medium borderline
GbarD08G0021850 Alkaloid H6H medium borderline
GbarD08G0021860 Alkaloid H6H medium borderline
GbarD09G0000530 Alkaloid H6H medium pass
GbarD09G0007050 Alkaloid H6H low borderline
GbarD09G0007080 Alkaloid H6H medium borderline
GbarD09G0009190 Alkaloid H6H low borderline
GbarD09G0009800 Alkaloid H6H low borderline
GbarD09G0015530 Alkaloid H6H medium borderline
GbarD09G0023980 Alkaloid H6H medium borderline
GbarD10G0006950 Alkaloid H6H low borderline
GbarD10G0007100 Alkaloid H6H low borderline
GbarD10G0007900 Alkaloid H6H low borderline
GbarD10G0007910 Alkaloid H6H low borderline
GbarD10G0007920 Alkaloid H6H low borderline
GbarD10G0018760 Alkaloid H6H medium borderline
GbarD11G0002170 Alkaloid H6H low borderline
GbarD11G0004440 Alkaloid H6H low borderline
GbarD11G0013840 Alkaloid H6H medium borderline
GbarD11G0018710 Alkaloid H6H high pass
GbarD11G0026960 Alkaloid H6H low borderline
GbarD11G0026970 Alkaloid H6H low borderline
GbarD12G0000260 Alkaloid H6H low borderline
GbarD12G0006160 Alkaloid H6H high pass
GbarD12G0023230 Alkaloid H6H medium borderline
GbarD12G0026810 Alkaloid H6H medium borderline
GbarD13G0001600 Alkaloid H6H low borderline
GbarD13G0005350 Alkaloid H6H medium borderline
GbarD13G0017500 Alkaloid H6H low borderline
GbarD13G0023170 Alkaloid H6H low borderline
GbarD13G0023180 Alkaloid H6H low borderline
GbarD13G0023190 Alkaloid H6H low borderline
GbarD13G0023200 Alkaloid H6H low borderline