PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HCT
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Gene Pathway Family Confidence Status Best Target
GbarD04G0014200 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
GbarD04G0020170 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
GbarD05G0005410 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
GbarD05G0005430 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
GbarD05G0005530 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
GbarD05G0011740 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
GbarD05G0011870 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
GbarD05G0018350 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
GbarD05G0034570 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
GbarD06G0006230 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
GbarD06G0022360 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
GbarD06G0022390 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
GbarD06G0022400 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
GbarD06G0022480 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
GbarD06G0022490 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
GbarD06G0022500 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
GbarD06G0022510 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
GbarD07G0010570 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
GbarD07G0025680 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
GbarD08G0018610 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
GbarD08G0025970 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
GbarD10G0008750 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
GbarD10G0012940 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
GbarD10G0012950 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
GbarD10G0013020 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
GbarD10G0013050 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
GbarD10G0020050 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
GbarD10G0026820 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
GbarD10G0026830 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
GbarD10G0027530 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
GbarD11G0011140 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
GbarD11G0025160 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
GbarD11G0025200 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
GbarD12G0016700 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
GbarD13G0011710 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
GbarD13G0018090 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
GbarD13G0018110 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
GbarD13G0018120 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
GbarD13G0018130 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Gbarscaffold27529_obj0003090 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Gbarscaffold47554_obj0005580 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Gbarscaffold548_obj0006190 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Gbarscaffold548_obj0006200 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Gbarscaffold582_subseq_6997805_7036964_obj_D030006400 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Gbarscaffold8503_obj0007530 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC