PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
GbarA01G0011260 Flavonoid IFR high pass
GbarA01G0022840 Flavonoid IFR low borderline
GbarA02G0005140 Flavonoid IFR low borderline
GbarA02G0011080 Flavonoid IFR low borderline
GbarA03G0005120 Flavonoid IFR low borderline
GbarA03G0009260 Flavonoid IFR medium pass
GbarA03G0021970 Flavonoid IFR high pass
GbarA03G0023370 Flavonoid IFR medium pass
GbarA04G0009740 Flavonoid IFR low borderline
GbarA04G0015450 Flavonoid IFR high pass
GbarA05G0006410 Flavonoid IFR low borderline
GbarA05G0011770 Flavonoid IFR low borderline
GbarA05G0038970 Flavonoid IFR low borderline
GbarA06G0015320 Flavonoid IFR low borderline
GbarA06G0023930 Flavonoid IFR high pass
GbarA08G0017710 Flavonoid IFR high pass
GbarA08G0017730 Flavonoid IFR high pass
GbarA08G0017940 Flavonoid IFR low borderline
GbarA09G0009670 Flavonoid IFR low borderline
GbarA09G0012680 Flavonoid IFR low borderline
GbarA09G0017170 Flavonoid IFR low borderline
GbarA09G0020550 Flavonoid IFR low borderline
GbarA10G0010360 Flavonoid IFR medium pass
GbarA10G0020010 Flavonoid IFR low borderline
GbarA10G0023910 Flavonoid IFR low borderline
GbarA11G0011960 Flavonoid IFR low borderline
GbarA11G0013940 Flavonoid IFR low borderline
GbarA11G0030800 Flavonoid IFR low borderline
GbarA12G0006430 Flavonoid IFR high pass
GbarA12G0014760 Flavonoid IFR low borderline
GbarA12G0018940 Flavonoid IFR high pass
GbarA12G0028550 Flavonoid IFR high pass
GbarA13G0008220 Flavonoid IFR low borderline
GbarD01G0011850 Flavonoid IFR high pass
GbarD01G0023650 Flavonoid IFR low borderline
GbarD02G0005340 Flavonoid IFR low borderline
GbarD02G0009780 Flavonoid IFR medium pass
GbarD02G0022120 Flavonoid IFR low borderline
GbarD02G0023680 Flavonoid IFR high pass
GbarD02G0025050 Flavonoid IFR medium pass
GbarD03G0014600 Flavonoid IFR low borderline
GbarD04G0004700 Flavonoid IFR low borderline
GbarD04G0013070 Flavonoid IFR low borderline
GbarD04G0018880 Flavonoid IFR high pass
GbarD05G0006370 Flavonoid IFR low borderline
GbarD05G0011780 Flavonoid IFR low borderline
GbarD05G0020550 Flavonoid IFR low borderline
GbarD06G0015700 Flavonoid IFR low borderline
GbarD06G0024290 Flavonoid IFR high pass
GbarD08G0008190 Flavonoid IFR low borderline