PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
GbarA01G0003960 Flavonoid IFS low borderline
GbarA01G0003970 Flavonoid IFS low borderline
GbarA01G0003980 Flavonoid IFS low borderline
GbarA01G0005240 Flavonoid IFS low borderline
GbarA01G0005250 Flavonoid IFS low borderline
GbarA01G0006250 Flavonoid IFS medium borderline
GbarA01G0007610 Flavonoid IFS low borderline
GbarA01G0008450 Flavonoid IFS medium borderline
GbarA01G0008480 Flavonoid IFS medium borderline
GbarA01G0008500 Flavonoid IFS medium borderline
GbarA01G0008540 Flavonoid IFS medium borderline
GbarA01G0008560 Flavonoid IFS low borderline
GbarA01G0011560 Flavonoid IFS medium borderline
GbarA01G0021190 Flavonoid IFS medium borderline
GbarA01G0021200 Flavonoid IFS medium borderline
GbarA01G0021210 Flavonoid IFS medium borderline
GbarA01G0022470 Flavonoid IFS low borderline
GbarA02G0000510 Flavonoid IFS medium borderline
GbarA02G0002480 Flavonoid IFS low borderline
GbarA02G0002530 Flavonoid IFS low borderline
GbarA02G0002550 Flavonoid IFS low borderline
GbarA02G0002570 Flavonoid IFS low borderline
GbarA02G0006960 Flavonoid IFS low borderline
GbarA02G0009000 Flavonoid IFS medium borderline
GbarA02G0009030 Flavonoid IFS medium borderline
GbarA02G0018280 Flavonoid IFS medium borderline
GbarA02G0019470 Flavonoid IFS low borderline
GbarA03G0001930 Flavonoid IFS medium borderline
GbarA03G0001980 Flavonoid IFS medium borderline
GbarA03G0002330 Flavonoid IFS low borderline
GbarA03G0002340 Flavonoid IFS low borderline
GbarA03G0005600 Flavonoid IFS low borderline
GbarA03G0006170 Flavonoid IFS low borderline
GbarA03G0008970 Flavonoid IFS medium borderline
GbarA03G0015330 Flavonoid IFS low borderline
GbarA03G0021320 Flavonoid IFS low borderline
GbarA04G0005250 Flavonoid IFS medium borderline
GbarA04G0007550 Flavonoid IFS low borderline
GbarA04G0008490 Flavonoid IFS medium borderline
GbarA04G0012910 Flavonoid IFS low borderline
GbarA04G0015670 Flavonoid IFS medium borderline
GbarA04G0015680 Flavonoid IFS medium borderline
GbarA05G0006910 Flavonoid IFS medium borderline
GbarA05G0008410 Flavonoid IFS low borderline
GbarA05G0009010 Flavonoid IFS low borderline
GbarA05G0009810 Flavonoid IFS low borderline
GbarA05G0011620 Flavonoid IFS low borderline
GbarA05G0013640 Flavonoid IFS low borderline
GbarA05G0015010 Flavonoid IFS low borderline
GbarA05G0018780 Flavonoid IFS medium pass