PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
GbarA05G0019520 Flavonoid IFS low borderline
GbarA05G0019530 Flavonoid IFS low borderline
GbarA05G0019810 Flavonoid IFS medium borderline
GbarA05G0019820 Flavonoid IFS medium borderline
GbarA05G0019830 Flavonoid IFS medium borderline
GbarA05G0020320 Flavonoid IFS low borderline
GbarA05G0020770 Flavonoid IFS medium borderline
GbarA05G0020820 Flavonoid IFS medium borderline
GbarA05G0026400 Flavonoid IFS medium borderline
GbarA05G0029610 Flavonoid IFS medium borderline
GbarA05G0029630 Flavonoid IFS medium borderline
GbarA05G0039890 Flavonoid IFS low borderline
GbarA05G0041710 Flavonoid IFS low borderline
GbarA06G0000750 Flavonoid IFS low borderline
GbarA06G0001330 Flavonoid IFS medium borderline
GbarA06G0001350 Flavonoid IFS medium borderline
GbarA06G0001360 Flavonoid IFS medium borderline
GbarA06G0001370 Flavonoid IFS medium borderline
GbarA06G0001380 Flavonoid IFS medium borderline
GbarA06G0001400 Flavonoid IFS medium borderline
GbarA06G0001420 Flavonoid IFS medium borderline
GbarA06G0002270 Flavonoid IFS medium borderline
GbarA06G0008390 Flavonoid IFS medium borderline
GbarA06G0018250 Flavonoid IFS low borderline
GbarA06G0018900 Flavonoid IFS low borderline
GbarA06G0020360 Flavonoid IFS low borderline
GbarA06G0023330 Flavonoid IFS low borderline
GbarA06G0023340 Flavonoid IFS medium borderline
GbarA07G0000230 Flavonoid IFS low borderline
GbarA07G0004590 Flavonoid IFS low borderline
GbarA07G0005720 Flavonoid IFS low borderline
GbarA07G0006230 Flavonoid IFS medium borderline
GbarA07G0008630 Flavonoid IFS medium borderline
GbarA07G0008660 Flavonoid IFS medium borderline
GbarA07G0010210 Flavonoid IFS medium borderline
GbarA07G0010890 Flavonoid IFS low borderline
GbarA07G0011290 Flavonoid IFS low borderline
GbarA07G0013180 Flavonoid IFS medium borderline
GbarA07G0013910 Flavonoid IFS low borderline
GbarA07G0017310 Flavonoid IFS low borderline
GbarA07G0020120 Flavonoid IFS low borderline
GbarA07G0021920 Flavonoid IFS medium pass
GbarA07G0023290 Flavonoid IFS medium borderline
GbarA08G0000820 Flavonoid IFS low borderline
GbarA08G0001870 Flavonoid IFS low borderline
GbarA08G0015410 Flavonoid IFS low borderline
GbarA08G0015790 Flavonoid IFS low borderline
GbarA08G0017460 Flavonoid IFS low borderline
GbarA08G0018410 Flavonoid IFS low borderline
GbarA08G0018420 Flavonoid IFS low borderline