PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
GbarA08G0018430 Flavonoid IFS low borderline
GbarA08G0020130 Flavonoid IFS medium borderline
GbarA08G0020160 Flavonoid IFS medium borderline
GbarA08G0020170 Flavonoid IFS medium borderline
GbarA08G0020230 Flavonoid IFS medium borderline
GbarA08G0020950 Flavonoid IFS low borderline
GbarA08G0027770 Flavonoid IFS low borderline
GbarA09G0003190 Flavonoid IFS low borderline
GbarA09G0005150 Flavonoid IFS low borderline
GbarA09G0006220 Flavonoid IFS medium borderline
GbarA09G0011220 Flavonoid IFS low borderline
GbarA09G0014190 Flavonoid IFS medium borderline
GbarA09G0014200 Flavonoid IFS medium borderline
GbarA09G0014210 Flavonoid IFS medium borderline
GbarA09G0020940 Flavonoid IFS medium borderline
GbarA09G0020970 Flavonoid IFS medium borderline
GbarA09G0020990 Flavonoid IFS low borderline
GbarA09G0021500 Flavonoid IFS low borderline
GbarA09G0021590 Flavonoid IFS medium borderline
GbarA09G0021600 Flavonoid IFS medium borderline
GbarA09G0022320 Flavonoid IFS medium borderline
GbarA09G0022330 Flavonoid IFS medium borderline
GbarA10G0000550 Flavonoid IFS low borderline
GbarA10G0001320 Flavonoid IFS low borderline
GbarA10G0005490 Flavonoid IFS medium borderline
GbarA10G0005500 Flavonoid IFS medium borderline
GbarA10G0009740 Flavonoid IFS medium borderline
GbarA10G0021090 Flavonoid IFS medium borderline
GbarA10G0021100 Flavonoid IFS medium borderline
GbarA10G0021110 Flavonoid IFS medium borderline
GbarA10G0021120 Flavonoid IFS medium borderline
GbarA10G0021130 Flavonoid IFS medium borderline
GbarA10G0021140 Flavonoid IFS medium borderline
GbarA10G0021340 Flavonoid IFS low borderline
GbarA10G0021820 Flavonoid IFS low borderline
GbarA10G0021850 Flavonoid IFS medium borderline
GbarA10G0021870 Flavonoid IFS medium borderline
GbarA10G0023680 Flavonoid IFS medium borderline
GbarA10G0026030 Flavonoid IFS low borderline
GbarA10G0026180 Flavonoid IFS medium borderline
GbarA11G0000740 Flavonoid IFS medium borderline
GbarA11G0003780 Flavonoid IFS medium borderline
GbarA11G0003890 Flavonoid IFS low borderline
GbarA11G0004570 Flavonoid IFS medium borderline
GbarA11G0008480 Flavonoid IFS low borderline
GbarA11G0008490 Flavonoid IFS low borderline
GbarA11G0008500 Flavonoid IFS low borderline
GbarA11G0009330 Flavonoid IFS low borderline
GbarA11G0014020 Flavonoid IFS medium borderline
GbarA11G0014680 Flavonoid IFS medium borderline