PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
GbarA11G0015410 Flavonoid IFS low borderline
GbarA11G0018700 Flavonoid IFS medium borderline
GbarA11G0018820 Flavonoid IFS low borderline
GbarA11G0019260 Flavonoid IFS low borderline
GbarA11G0019690 Flavonoid IFS medium borderline
GbarA11G0019710 Flavonoid IFS medium borderline
GbarA11G0023360 Flavonoid IFS medium borderline
GbarA11G0034500 Flavonoid IFS low borderline
GbarA11G0036790 Flavonoid IFS medium borderline
GbarA12G0005620 Flavonoid IFS medium borderline
GbarA12G0008000 Flavonoid IFS medium borderline
GbarA12G0015810 Flavonoid IFS low borderline
GbarA12G0016500 Flavonoid IFS medium borderline
GbarA12G0018350 Flavonoid IFS low borderline
GbarA12G0020120 Flavonoid IFS medium borderline
GbarA12G0020500 Flavonoid IFS medium borderline
GbarA12G0020510 Flavonoid IFS low borderline
GbarA12G0022130 Flavonoid IFS low borderline
GbarA12G0022450 Flavonoid IFS medium borderline
GbarA12G0022460 Flavonoid IFS medium borderline
GbarA12G0024580 Flavonoid IFS low borderline
GbarA12G0024910 Flavonoid IFS low borderline
GbarA13G0001260 Flavonoid IFS low borderline
GbarA13G0002350 Flavonoid IFS medium borderline
GbarA13G0002370 Flavonoid IFS medium borderline
GbarA13G0002980 Flavonoid IFS medium borderline
GbarA13G0003790 Flavonoid IFS low borderline
GbarA13G0003970 Flavonoid IFS low borderline
GbarA13G0006250 Flavonoid IFS low borderline
GbarA13G0010960 Flavonoid IFS low borderline
GbarA13G0013940 Flavonoid IFS low borderline
GbarA13G0014120 Flavonoid IFS low borderline
GbarA13G0014280 Flavonoid IFS medium borderline
GbarA13G0014450 Flavonoid IFS medium borderline
GbarA13G0015760 Flavonoid IFS medium borderline
GbarA13G0026350 Flavonoid IFS medium borderline
GbarD01G0003900 Flavonoid IFS low borderline
GbarD01G0003910 Flavonoid IFS low borderline
GbarD01G0006170 Flavonoid IFS medium borderline
GbarD01G0007680 Flavonoid IFS low borderline
GbarD01G0008590 Flavonoid IFS medium borderline
GbarD01G0008600 Flavonoid IFS medium borderline
GbarD01G0008650 Flavonoid IFS medium borderline
GbarD01G0008710 Flavonoid IFS medium borderline
GbarD01G0012180 Flavonoid IFS medium borderline
GbarD01G0022110 Flavonoid IFS medium borderline
GbarD01G0022120 Flavonoid IFS medium borderline
GbarD01G0022130 Flavonoid IFS medium borderline
GbarD01G0023290 Flavonoid IFS low borderline
GbarD02G0000510 Flavonoid IFS medium borderline