PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
GbarD02G0002400 Flavonoid IFS low borderline
GbarD02G0002730 Flavonoid IFS low borderline
GbarD02G0002760 Flavonoid IFS low borderline
GbarD02G0002810 Flavonoid IFS low borderline
GbarD02G0007060 Flavonoid IFS low borderline
GbarD02G0007090 Flavonoid IFS low borderline
GbarD02G0009120 Flavonoid IFS medium borderline
GbarD02G0009150 Flavonoid IFS medium borderline
GbarD02G0009590 Flavonoid IFS low borderline
GbarD02G0017110 Flavonoid IFS low borderline
GbarD02G0017150 Flavonoid IFS medium borderline
GbarD02G0017160 Flavonoid IFS medium borderline
GbarD02G0023000 Flavonoid IFS low borderline
GbarD03G0001150 Flavonoid IFS low borderline
GbarD03G0002320 Flavonoid IFS medium borderline
GbarD03G0011650 Flavonoid IFS medium borderline
GbarD03G0011670 Flavonoid IFS medium borderline
GbarD03G0013010 Flavonoid IFS low borderline
GbarD03G0013370 Flavonoid IFS low borderline
GbarD03G0013590 Flavonoid IFS low borderline
GbarD03G0014060 Flavonoid IFS low borderline
GbarD03G0017350 Flavonoid IFS low borderline
GbarD03G0017760 Flavonoid IFS medium borderline
GbarD04G0001210 Flavonoid IFS low borderline
GbarD04G0007980 Flavonoid IFS low borderline
GbarD04G0011280 Flavonoid IFS low borderline
GbarD04G0016380 Flavonoid IFS low borderline
GbarD04G0019090 Flavonoid IFS medium borderline
GbarD04G0019100 Flavonoid IFS medium borderline
GbarD04G0020310 Flavonoid IFS low borderline
GbarD05G0001960 Flavonoid IFS low borderline
GbarD05G0003380 Flavonoid IFS low borderline
GbarD05G0008930 Flavonoid IFS low borderline
GbarD05G0009670 Flavonoid IFS low borderline
GbarD05G0011620 Flavonoid IFS low borderline
GbarD05G0013680 Flavonoid IFS low borderline
GbarD05G0015230 Flavonoid IFS low borderline
GbarD05G0019920 Flavonoid IFS low borderline
GbarD05G0019930 Flavonoid IFS low borderline
GbarD05G0020170 Flavonoid IFS medium borderline
GbarD05G0020180 Flavonoid IFS medium borderline
GbarD05G0020190 Flavonoid IFS medium borderline
GbarD05G0020630 Flavonoid IFS low borderline
GbarD05G0021080 Flavonoid IFS medium borderline
GbarD05G0021130 Flavonoid IFS low borderline
GbarD05G0026410 Flavonoid IFS medium borderline
GbarD05G0026620 Flavonoid IFS medium borderline
GbarD05G0029810 Flavonoid IFS medium borderline
GbarD05G0035290 Flavonoid IFS medium borderline
GbarD06G0000610 Flavonoid IFS low borderline