PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Protein/Isoform Record Pathway Family Confidence Status
GbarD09G0021660 Flavonoid IFS medium borderline
GbarD10G0000610 Flavonoid IFS low borderline
GbarD10G0001430 Flavonoid IFS low borderline
GbarD10G0001480 Flavonoid IFS medium pass
GbarD10G0005810 Flavonoid IFS medium borderline
GbarD10G0005820 Flavonoid IFS medium borderline
GbarD10G0009830 Flavonoid IFS medium borderline
GbarD10G0015360 Flavonoid IFS medium borderline
GbarD10G0015390 Flavonoid IFS low borderline
GbarD10G0020660 Flavonoid IFS medium borderline
GbarD10G0022240 Flavonoid IFS medium borderline
GbarD10G0022270 Flavonoid IFS low borderline
GbarD10G0022280 Flavonoid IFS medium borderline
GbarD10G0022290 Flavonoid IFS medium borderline
GbarD10G0022470 Flavonoid IFS low borderline
GbarD10G0022790 Flavonoid IFS low borderline
GbarD10G0022890 Flavonoid IFS medium borderline
GbarD10G0022900 Flavonoid IFS medium borderline
GbarD10G0022910 Flavonoid IFS medium borderline
GbarD10G0022920 Flavonoid IFS medium borderline
GbarD10G0024610 Flavonoid IFS medium borderline
GbarD10G0025350 Flavonoid IFS medium borderline
GbarD10G0026170 Flavonoid IFS medium borderline
GbarD10G0026190 Flavonoid IFS medium borderline
GbarD10G0027130 Flavonoid IFS low borderline
GbarD11G0003940 Flavonoid IFS medium borderline
GbarD11G0004060 Flavonoid IFS low borderline
GbarD11G0004780 Flavonoid IFS medium borderline
GbarD11G0008860 Flavonoid IFS low borderline
GbarD11G0008870 Flavonoid IFS low borderline
GbarD11G0008880 Flavonoid IFS low borderline
GbarD11G0009600 Flavonoid IFS low borderline
GbarD11G0014380 Flavonoid IFS medium borderline
GbarD11G0014920 Flavonoid IFS medium borderline
GbarD11G0015660 Flavonoid IFS low borderline
GbarD11G0019030 Flavonoid IFS medium borderline
GbarD11G0019150 Flavonoid IFS low borderline
GbarD11G0019570 Flavonoid IFS low borderline
GbarD11G0020030 Flavonoid IFS medium borderline
GbarD11G0021180 Flavonoid IFS medium borderline
GbarD11G0023030 Flavonoid IFS low borderline
GbarD11G0034560 Flavonoid IFS low borderline
GbarD11G0034570 Flavonoid IFS low borderline
GbarD12G0004320 Flavonoid IFS medium borderline
GbarD12G0005820 Flavonoid IFS medium borderline
GbarD12G0009690 Flavonoid IFS medium borderline
GbarD12G0015830 Flavonoid IFS low borderline
GbarD12G0016570 Flavonoid IFS medium borderline
GbarD12G0017890 Flavonoid IFS low borderline
GbarD12G0018300 Flavonoid IFS low borderline