PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
GbarA01G0021200 Alkaloid IO medium borderline
GbarA02G0006960 Alkaloid IO medium borderline
GbarA02G0010880 Alkaloid IO medium borderline
GbarA02G0016010 Alkaloid IO medium borderline
GbarA04G0008480 Alkaloid IO medium borderline
GbarA04G0008490 Alkaloid IO medium borderline
GbarA04G0013880 Alkaloid IO low borderline
GbarA04G0015680 Alkaloid IO medium borderline
GbarA05G0006910 Alkaloid IO medium borderline
GbarA05G0011040 Alkaloid IO medium pass
GbarA05G0019760 Alkaloid IO medium borderline
GbarA05G0019780 Alkaloid IO medium borderline
GbarA05G0026160 Alkaloid IO low borderline
GbarA06G0001380 Alkaloid IO medium borderline
GbarA07G0017300 Alkaloid IO medium borderline
GbarA08G0001320 Alkaloid IO low borderline
GbarA08G0012720 Alkaloid IO medium borderline
GbarA08G0014910 Alkaloid IO medium borderline
GbarA09G0014220 Alkaloid IO medium pass
GbarA09G0015290 Alkaloid IO medium pass
GbarA09G0020980 Alkaloid IO medium borderline
GbarA09G0021590 Alkaloid IO medium borderline
GbarA11G0019260 Alkaloid IO low borderline
GbarA11G0023340 Alkaloid IO medium borderline
GbarA11G0036790 Alkaloid IO medium borderline
GbarA12G0002820 Alkaloid IO low borderline
GbarA12G0028460 Alkaloid IO medium borderline
GbarA12G0028470 Alkaloid IO medium borderline
GbarA13G0014280 Alkaloid IO medium borderline
GbarD01G0022120 Alkaloid IO medium borderline
GbarD02G0007060 Alkaloid IO medium borderline
GbarD02G0007090 Alkaloid IO medium borderline
GbarD02G0009590 Alkaloid IO low borderline
GbarD02G0017090 Alkaloid IO low borderline
GbarD03G0009720 Alkaloid IO medium borderline
GbarD04G0011690 Alkaloid IO medium borderline
GbarD05G0004210 Alkaloid IO medium borderline
GbarD05G0006910 Alkaloid IO medium borderline
GbarD05G0010990 Alkaloid IO medium pass
GbarD05G0015250 Alkaloid IO low borderline
GbarD05G0020150 Alkaloid IO medium borderline
GbarD05G0026400 Alkaloid IO low borderline
GbarD06G0001100 Alkaloid IO low borderline
GbarD06G0001170 Alkaloid IO medium borderline
GbarD06G0001180 Alkaloid IO medium borderline
GbarD06G0001240 Alkaloid IO medium borderline
GbarD06G0023690 Alkaloid IO medium borderline
GbarD07G0013020 Alkaloid IO medium borderline
GbarD08G0015100 Alkaloid IO medium borderline
GbarD09G0013720 Alkaloid IO low borderline