PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
GbarA11G0037450 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarA12G0010820 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarA12G0010830 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarA12G0012950 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarA12G0019240 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
GbarA13G0001970 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarA13G0002360 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarA13G0002380 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarA13G0002570 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarA13G0003300 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarA13G0010220 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarA13G0023780 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarA13G0023800 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarA13G0023810 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarA13G0023820 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarA13G0023830 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarA13G0025530 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarD01G0024740 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarD01G0025150 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarD02G0006810 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
GbarD03G0004480 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarD03G0010600 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarD03G0013450 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarD03G0014000 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarD03G0014030 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarD03G0016190 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarD04G0013520 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarD04G0013970 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarD04G0013980 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarD04G0013990 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarD04G0014020 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarD04G0014030 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarD04G0014180 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarD05G0009030 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarD05G0009890 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarD05G0009930 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarD05G0009940 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarD05G0018960 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
GbarD05G0025020 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
GbarD05G0025030 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
GbarD05G0025040 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarD05G0025050 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
GbarD05G0025060 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
GbarD05G0027570 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
GbarD05G0029700 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
GbarD05G0029710 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
GbarD05G0031070 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarD05G0031200 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarD06G0012480 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
GbarD06G0018860 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH