PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
GbarD06G0018870 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarD06G0018900 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarD08G0022470 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarD08G0023110 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarD09G0016620 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarD10G0010000 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarD10G0010280 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarD10G0026630 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarD10G0027380 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarD11G0010590 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarD11G0019420 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarD11G0019430 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarD11G0019730 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarD11G0020130 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarD11G0020150 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarD11G0037570 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarD11G0037590 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarD11G0037710 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarD12G0010720 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarD12G0013140 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarD12G0019240 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
GbarD13G0001930 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarD13G0002330 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarD13G0002540 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarD13G0003240 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarD13G0003260 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarD13G0009750 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarD13G0023760 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarD13G0023770 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarD13G0023780 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarD13G0023790 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarD13G0025450 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Gbarscaffold1797_obj_D050001450 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Gbarscaffold389_obj_A060004440 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH