PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
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Gene Pathway Family Confidence Status Best Target
GbarA01G0006360 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
GbarA01G0006370 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
GbarA02G0007750 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA02G0007760 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA02G0012620 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA04G0002880 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
GbarA04G0002900 Alkaloid NCS medium pass NCS__00005__sp_Q67A25_NCS_THLFG
GbarA04G0002910 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
GbarA05G0008820 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA05G0023280 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA05G0036750 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA05G0036760 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA06G0007210 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA07G0007170 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA07G0009350 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA07G0020900 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA08G0000660 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA08G0018500 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA08G0019280 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA08G0019470 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA08G0027360 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA10G0024500 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA11G0034560 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
GbarA12G0023050 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA12G0023060 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA12G0023090 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA13G0022480 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD01G0006280 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
GbarD01G0006290 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
GbarD02G0004730 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD02G0007920 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD02G0007940 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD04G0006680 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD04G0006690 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD05G0008740 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD05G0023500 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD05G0037910 Alkaloid NCS medium pass NCS__00005__sp_Q67A25_NCS_THLFG
GbarD05G0037920 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
GbarD06G0006980 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD07G0007030 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD07G0015830 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD08G0018670 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD08G0019400 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD08G0019410 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD08G0027320 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD10G0025590 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD11G0034650 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
GbarD12G0023210 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD12G0023220 Alkaloid NCS medium pass NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD13G0022300 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA