PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
GbarA01G0006250 Alkaloid T3O medium borderline
GbarA01G0007610 Alkaloid T3O medium pass
GbarA01G0008440 Alkaloid T3O medium borderline
GbarA01G0008450 Alkaloid T3O medium borderline
GbarA01G0008480 Alkaloid T3O medium borderline
GbarA01G0008500 Alkaloid T3O medium borderline
GbarA01G0008520 Alkaloid T3O medium borderline
GbarA01G0008540 Alkaloid T3O medium borderline
GbarA01G0009120 Alkaloid T3O medium borderline
GbarA01G0011560 Alkaloid T3O medium borderline
GbarA01G0021190 Alkaloid T3O medium borderline
GbarA01G0021210 Alkaloid T3O medium borderline
GbarA01G0021420 Alkaloid T3O medium borderline
GbarA02G0000510 Alkaloid T3O medium borderline
GbarA02G0009000 Alkaloid T3O medium borderline
GbarA02G0009030 Alkaloid T3O medium borderline
GbarA02G0016480 Alkaloid T3O medium borderline
GbarA02G0018280 Alkaloid T3O medium borderline
GbarA02G0019470 Alkaloid T3O medium pass
GbarA03G0001930 Alkaloid T3O medium borderline
GbarA03G0001980 Alkaloid T3O medium borderline
GbarA03G0002320 Alkaloid T3O medium pass
GbarA03G0002330 Alkaloid T3O medium pass
GbarA03G0002340 Alkaloid T3O low borderline
GbarA03G0005600 Alkaloid T3O medium pass
GbarA03G0006470 Alkaloid T3O medium pass
GbarA03G0008970 Alkaloid T3O medium borderline
GbarA03G0012330 Alkaloid T3O medium borderline
GbarA03G0015330 Alkaloid T3O low borderline
GbarA03G0017620 Alkaloid T3O low borderline
GbarA03G0021320 Alkaloid T3O medium pass
GbarA04G0005230 Alkaloid T3O medium borderline
GbarA04G0005240 Alkaloid T3O medium borderline
GbarA04G0005250 Alkaloid T3O medium borderline
GbarA04G0005260 Alkaloid T3O medium borderline
GbarA04G0012910 Alkaloid T3O medium pass
GbarA04G0015670 Alkaloid T3O medium borderline
GbarA05G0004200 Alkaloid T3O medium pass
GbarA05G0008410 Alkaloid T3O low borderline
GbarA05G0009010 Alkaloid T3O low borderline
GbarA05G0011620 Alkaloid T3O medium pass
GbarA05G0015010 Alkaloid T3O medium pass
GbarA05G0019770 Alkaloid T3O medium borderline
GbarA05G0019820 Alkaloid T3O medium borderline
GbarA05G0019830 Alkaloid T3O medium borderline
GbarA05G0020320 Alkaloid T3O medium pass
GbarA05G0020760 Alkaloid T3O medium borderline
GbarA05G0020770 Alkaloid T3O medium borderline
GbarA05G0020820 Alkaloid T3O medium borderline
GbarA05G0026400 Alkaloid T3O medium borderline