PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
GbarA05G0029610 Alkaloid T3O medium borderline
GbarA05G0031940 Alkaloid T3O medium borderline
GbarA05G0035490 Alkaloid T3O low borderline
GbarA05G0037390 Alkaloid T3O medium pass
GbarA05G0039890 Alkaloid T3O medium pass
GbarA05G0041570 Alkaloid T3O medium pass
GbarA05G0041710 Alkaloid T3O low borderline
GbarA05G0041730 Alkaloid T3O low borderline
GbarA05G0042530 Alkaloid T3O medium pass
GbarA06G0000750 Alkaloid T3O medium pass
GbarA06G0001330 Alkaloid T3O medium borderline
GbarA06G0001350 Alkaloid T3O medium borderline
GbarA06G0001360 Alkaloid T3O medium borderline
GbarA06G0001370 Alkaloid T3O medium borderline
GbarA06G0001400 Alkaloid T3O medium borderline
GbarA06G0001420 Alkaloid T3O medium borderline
GbarA06G0008390 Alkaloid T3O medium borderline
GbarA06G0012840 Alkaloid T3O medium borderline
GbarA06G0018250 Alkaloid T3O medium pass
GbarA06G0018900 Alkaloid T3O medium pass
GbarA06G0020360 Alkaloid T3O low borderline
GbarA07G0005720 Alkaloid T3O medium pass
GbarA07G0006230 Alkaloid T3O medium borderline
GbarA07G0008630 Alkaloid T3O medium borderline
GbarA07G0008660 Alkaloid T3O medium borderline
GbarA07G0008780 Alkaloid T3O medium pass
GbarA07G0010890 Alkaloid T3O medium pass
GbarA07G0020010 Alkaloid T3O medium pass
GbarA07G0023130 Alkaloid T3O low borderline
GbarA07G0023290 Alkaloid T3O medium borderline
GbarA07G0023780 Alkaloid T3O low borderline
GbarA07G0023790 Alkaloid T3O medium pass
GbarA08G0000820 Alkaloid T3O low borderline
GbarA08G0001870 Alkaloid T3O medium pass
GbarA08G0017460 Alkaloid T3O medium pass
GbarA08G0018410 Alkaloid T3O medium pass
GbarA08G0020130 Alkaloid T3O medium borderline
GbarA08G0020160 Alkaloid T3O medium borderline
GbarA08G0020170 Alkaloid T3O medium borderline
GbarA08G0020180 Alkaloid T3O medium borderline
GbarA08G0020230 Alkaloid T3O medium borderline
GbarA08G0021520 Alkaloid T3O medium pass
GbarA09G0001880 Alkaloid T3O medium borderline
GbarA09G0003190 Alkaloid T3O low borderline
GbarA09G0003290 Alkaloid T3O low borderline
GbarA09G0006220 Alkaloid T3O medium borderline
GbarA09G0006460 Alkaloid T3O medium borderline
GbarA09G0006470 Alkaloid T3O medium borderline
GbarA09G0011220 Alkaloid T3O medium pass
GbarA09G0014180 Alkaloid T3O medium borderline