PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
GbarD06G0019160 Alkaloid T3O medium pass
GbarD06G0020740 Alkaloid T3O low borderline
GbarD07G0005790 Alkaloid T3O medium pass
GbarD07G0006230 Alkaloid T3O medium borderline
GbarD07G0006260 Alkaloid T3O medium borderline
GbarD07G0008650 Alkaloid T3O medium borderline
GbarD07G0008660 Alkaloid T3O medium borderline
GbarD07G0008790 Alkaloid T3O medium pass
GbarD07G0010760 Alkaloid T3O medium pass
GbarD07G0017260 Alkaloid T3O medium borderline
GbarD07G0019970 Alkaloid T3O medium pass
GbarD07G0022730 Alkaloid T3O medium borderline
GbarD07G0023210 Alkaloid T3O low borderline
GbarD08G0000860 Alkaloid T3O medium pass
GbarD08G0001390 Alkaloid T3O low borderline
GbarD08G0001940 Alkaloid T3O medium pass
GbarD08G0012750 Alkaloid T3O medium borderline
GbarD08G0015610 Alkaloid T3O medium pass
GbarD08G0017670 Alkaloid T3O medium pass
GbarD08G0020310 Alkaloid T3O medium borderline
GbarD08G0020320 Alkaloid T3O medium borderline
GbarD08G0021750 Alkaloid T3O medium pass
GbarD09G0003340 Alkaloid T3O low borderline
GbarD09G0003350 Alkaloid T3O low borderline
GbarD09G0003360 Alkaloid T3O low borderline
GbarD09G0004260 Alkaloid T3O low borderline
GbarD09G0005800 Alkaloid T3O medium borderline
GbarD09G0005820 Alkaloid T3O medium borderline
GbarD09G0005830 Alkaloid T3O medium borderline
GbarD09G0005840 Alkaloid T3O medium borderline
GbarD09G0010740 Alkaloid T3O medium pass
GbarD09G0013680 Alkaloid T3O medium borderline
GbarD09G0013710 Alkaloid T3O medium borderline
GbarD09G0015150 Alkaloid T3O low borderline
GbarD09G0020350 Alkaloid T3O medium borderline
GbarD09G0020360 Alkaloid T3O medium borderline
GbarD09G0020860 Alkaloid T3O medium pass
GbarD09G0021650 Alkaloid T3O medium borderline
GbarD09G0021660 Alkaloid T3O medium borderline
GbarD10G0001430 Alkaloid T3O medium pass
GbarD10G0005810 Alkaloid T3O medium borderline
GbarD10G0005820 Alkaloid T3O medium borderline
GbarD10G0009830 Alkaloid T3O medium borderline
GbarD10G0011300 Alkaloid T3O low borderline
GbarD10G0015360 Alkaloid T3O medium borderline
GbarD10G0022240 Alkaloid T3O medium borderline
GbarD10G0022250 Alkaloid T3O medium borderline
GbarD10G0022280 Alkaloid T3O medium borderline
GbarD10G0022290 Alkaloid T3O medium borderline
GbarD10G0022470 Alkaloid T3O low borderline