PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
GbarD10G0022890 Alkaloid T3O medium borderline
GbarD10G0022900 Alkaloid T3O medium borderline
GbarD10G0022910 Alkaloid T3O medium borderline
GbarD10G0022920 Alkaloid T3O medium borderline
GbarD10G0025350 Alkaloid T3O medium borderline
GbarD10G0026180 Alkaloid T3O medium borderline
GbarD10G0027130 Alkaloid T3O medium pass
GbarD11G0000800 Alkaloid T3O medium borderline
GbarD11G0003940 Alkaloid T3O medium borderline
GbarD11G0004060 Alkaloid T3O low borderline
GbarD11G0004780 Alkaloid T3O medium borderline
GbarD11G0008860 Alkaloid T3O medium pass
GbarD11G0008880 Alkaloid T3O low borderline
GbarD11G0009600 Alkaloid T3O low borderline
GbarD11G0014380 Alkaloid T3O medium borderline
GbarD11G0014920 Alkaloid T3O medium borderline
GbarD11G0015660 Alkaloid T3O medium pass
GbarD11G0019030 Alkaloid T3O medium borderline
GbarD11G0019150 Alkaloid T3O medium pass
GbarD11G0019570 Alkaloid T3O medium pass
GbarD11G0020030 Alkaloid T3O medium borderline
GbarD11G0021180 Alkaloid T3O medium borderline
GbarD11G0023020 Alkaloid T3O medium borderline
GbarD11G0024150 Alkaloid T3O low borderline
GbarD11G0025000 Alkaloid T3O medium borderline
GbarD12G0004320 Alkaloid T3O medium borderline
GbarD12G0005820 Alkaloid T3O medium borderline
GbarD12G0006450 Alkaloid T3O medium pass
GbarD12G0009690 Alkaloid T3O medium borderline
GbarD12G0013240 Alkaloid T3O medium borderline
GbarD12G0017900 Alkaloid T3O medium borderline
GbarD12G0018300 Alkaloid T3O low borderline
GbarD12G0020100 Alkaloid T3O medium borderline
GbarD12G0020490 Alkaloid T3O medium borderline
GbarD12G0022300 Alkaloid T3O medium pass
GbarD12G0022630 Alkaloid T3O medium borderline
GbarD12G0022640 Alkaloid T3O medium borderline
GbarD12G0024230 Alkaloid T3O medium borderline
GbarD12G0024700 Alkaloid T3O medium pass
GbarD12G0026150 Alkaloid T3O medium borderline
GbarD12G0028240 Alkaloid T3O low borderline
GbarD12G0028700 Alkaloid T3O medium borderline
GbarD12G0028720 Alkaloid T3O medium borderline
GbarD13G0001260 Alkaloid T3O medium pass
GbarD13G0002320 Alkaloid T3O medium borderline
GbarD13G0002960 Alkaloid T3O medium borderline
GbarD13G0003940 Alkaloid T3O medium pass
GbarD13G0008000 Alkaloid T3O medium pass
GbarD13G0008610 Alkaloid T3O medium borderline
GbarD13G0008660 Alkaloid T3O medium pass