PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Protein/Isoform Record Pathway Family Confidence Status
GbarA01G0005540 Flavonoid UFGT high pass
GbarA01G0005550 Flavonoid UFGT medium pass
GbarA01G0005560 Flavonoid UFGT high pass
GbarA01G0005730 Flavonoid UFGT high pass
GbarA01G0007530 Flavonoid UFGT high pass
GbarA01G0012980 Flavonoid UFGT high pass
GbarA01G0015030 Flavonoid UFGT high pass
GbarA01G0021120 Flavonoid UFGT medium pass
GbarA02G0000680 Flavonoid UFGT medium pass
GbarA02G0001380 Flavonoid UFGT medium pass
GbarA02G0003320 Flavonoid UFGT medium pass
GbarA02G0006330 Flavonoid UFGT medium pass
GbarA02G0006350 Flavonoid UFGT medium pass
GbarA02G0006360 Flavonoid UFGT high pass
GbarA02G0011690 Flavonoid UFGT high pass
GbarA02G0016500 Flavonoid UFGT high pass
GbarA02G0016730 Flavonoid UFGT medium pass
GbarA02G0016740 Flavonoid UFGT medium pass
GbarA02G0019020 Flavonoid UFGT medium pass
GbarA03G0002750 Flavonoid UFGT high pass
GbarA03G0004060 Flavonoid UFGT medium pass
GbarA03G0006230 Flavonoid UFGT medium pass
GbarA03G0006250 Flavonoid UFGT high pass
GbarA03G0006260 Flavonoid UFGT high pass
GbarA03G0008600 Flavonoid UFGT medium pass
GbarA03G0008610 Flavonoid UFGT high pass
GbarA03G0020960 Flavonoid UFGT medium pass
GbarA03G0020970 Flavonoid UFGT medium pass
GbarA04G0000390 Flavonoid UFGT medium pass
GbarA04G0008730 Flavonoid UFGT medium pass
GbarA04G0008740 Flavonoid UFGT high pass
GbarA04G0008760 Flavonoid UFGT high pass
GbarA04G0010550 Flavonoid UFGT medium pass
GbarA04G0017410 Flavonoid UFGT high pass
GbarA04G0017420 Flavonoid UFGT medium pass
GbarA05G0003130 Flavonoid UFGT high pass
GbarA05G0003140 Flavonoid UFGT medium pass
GbarA05G0003210 Flavonoid UFGT medium pass
GbarA05G0004920 Flavonoid UFGT high pass
GbarA05G0010970 Flavonoid UFGT high pass
GbarA05G0022550 Flavonoid UFGT medium pass
GbarA05G0024390 Flavonoid UFGT low borderline
GbarA05G0030980 Flavonoid UFGT medium pass
GbarA05G0031600 Flavonoid UFGT medium pass
GbarA05G0034030 Flavonoid UFGT medium pass
GbarA05G0036540 Flavonoid UFGT low borderline
GbarA05G0036560 Flavonoid UFGT high pass
GbarA05G0039010 Flavonoid UFGT medium pass
GbarA05G0039200 Flavonoid UFGT medium pass
GbarA05G0042830 Flavonoid UFGT high pass