PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarD06G0021310 Alkaloid BBE medium borderline
GbarD06G0021330 Alkaloid BBE medium borderline
GbarD07G0006780 Alkaloid BBE medium borderline
GbarD07G0006790 Alkaloid BBE medium borderline
GbarD09G0014320 Alkaloid BBE low borderline
GbarD09G0021730 Alkaloid BBE medium borderline
GbarD10G0000680 Alkaloid BBE medium borderline
GbarD10G0000690 Alkaloid BBE medium borderline
GbarD10G0000700 Alkaloid BBE medium borderline
GbarD10G0000710 Alkaloid BBE medium borderline
GbarD10G0000720 Alkaloid BBE medium borderline
GbarD10G0000740 Alkaloid BBE medium borderline
GbarD10G0000750 Alkaloid BBE medium borderline
GbarD10G0000760 Alkaloid BBE medium borderline
GbarD10G0012080 Alkaloid BBE medium borderline
GbarD10G0012820 Alkaloid BBE medium borderline
GbarD10G0014720 Alkaloid BBE medium borderline
GbarD12G0028150 Alkaloid BBE medium borderline
GbarD13G0001940 Alkaloid BBE medium borderline
Gbarscaffold2598_obj_A100002880 Alkaloid BBE medium borderline
GbarA01G0018790 Alkaloid CNMT low borderline
GbarA01G0018840 Alkaloid CNMT low borderline
GbarA02G0004430 Alkaloid CNMT medium pass
GbarA02G0004440 Alkaloid CNMT medium pass
GbarA02G0019480 Alkaloid CNMT low borderline
GbarA04G0014110 Alkaloid CNMT low borderline
GbarA05G0004060 Alkaloid CNMT medium borderline
GbarA05G0042730 Alkaloid CNMT low borderline
GbarA07G0005300 Alkaloid CNMT low borderline
GbarA07G0008250 Alkaloid CNMT low borderline
GbarA09G0018100 Alkaloid CNMT low borderline
GbarA10G0017400 Alkaloid CNMT medium pass
GbarA11G0017450 Alkaloid CNMT low borderline
GbarA13G0008170 Alkaloid CNMT low borderline
GbarD01G0019860 Alkaloid CNMT low borderline
GbarD02G0004540 Alkaloid CNMT low borderline
GbarD02G0004550 Alkaloid CNMT medium pass
GbarD03G0001140 Alkaloid CNMT low borderline
GbarD04G0001030 Alkaloid CNMT low borderline
GbarD04G0017580 Alkaloid CNMT low borderline
GbarD05G0004080 Alkaloid CNMT medium borderline
GbarD05G0027000 Alkaloid CNMT low borderline
GbarD07G0005360 Alkaloid CNMT low borderline
GbarD07G0008260 Alkaloid CNMT low borderline
GbarD09G0017620 Alkaloid CNMT low borderline
GbarD10G0009150 Alkaloid CNMT medium pass
GbarD11G0017790 Alkaloid CNMT low borderline
GbarA01G0000610 Alkaloid CODM/T6ODM medium borderline
GbarA01G0003110 Alkaloid CODM/T6ODM medium borderline
GbarA01G0003540 Alkaloid CODM/T6ODM medium borderline